Gene Psyr_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1143 
Symbol 
ID3366637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1295318 
End bp1295950 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content57% 
IMG OID637651484 
Productcytochrome c oxidase, subunit III 
Protein accessionYP_234235 
Protein GI66044394 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.537108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.82105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAATA TTGCAATCAA CTCCGGAGCC CACGATCACG GTCACGACCA TGATCATGGG 
CATGACGATC ACCACGACAG CGGTGGCATG ACGGTCTACG GCTTCTGGCT GTACCTGATG
ACCGACTGCG TGTTGTTCGC CTCGTTCTTC GCGGTGTACG CCGTGATGGT CAACAGTGTC
GCGGGCGGCC CGTCGGGCCA GGACATCTTC CTGCTGCCAT TCGTGGCAGT GGAAACCGCG
TTCCTGTTGG TCAGTAGTAT CACTTACGGC TTTGCCATGC TGGCACTGTA CAAGGGCAAT
AAGAGCCAGG TACTGGGCTG GCTGGCACTG ACCTTCCTGT GCGGTGCTGC CTTTATCGGC
ATGGAAATCT ATGAGTTCCA TCACCTGATC GAAGAGGGCT ACGGTCCGAG CCGCAGCGGC
TTCCTGTCAG CGTTCTTCGC GCTGGTAGGT CTGCACGGCG CCCACGTGAC CAGTGGTCTG
ATCTGGATGG CGATCATGAT GTTCCAGGTC CAGAAGAAGG GCCTGACCAA CACCAACAAG
ACGCGCCTGA GCTGCCTGAG CCTGTTCTGG CACTTCCTGG ACGTTGTCTG GATCGGCGTG
TTCACCGTTG TCTATCTGAT GGGAGCTTTG TAA
 
Protein sequence
MSNIAINSGA HDHGHDHDHG HDDHHDSGGM TVYGFWLYLM TDCVLFASFF AVYAVMVNSV 
AGGPSGQDIF LLPFVAVETA FLLVSSITYG FAMLALYKGN KSQVLGWLAL TFLCGAAFIG
MEIYEFHHLI EEGYGPSRSG FLSAFFALVG LHGAHVTSGL IWMAIMMFQV QKKGLTNTNK
TRLSCLSLFW HFLDVVWIGV FTVVYLMGAL