Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1119 |
Symbol | |
ID | 3366613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1268157 |
End bp | 1269023 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651460 |
Product | DNA-binding transcriptional regulator HexR |
Protein accession | YP_234211 |
Protein GI | 66044370 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.942787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCGCG TAAGAAACCT CCTGGAGCAA ATCCAGGGCC GACTCGACGA GCTGAACAAG GCCGAACGCA AAGTGGCCGA AGTCATCCTG CTCAACCCGC AGATGGCCAC GCGGCTGAGC ATTGCAGCGC TTGCCCAGGC CGCCAAGGTC AGCGAGCCGA CGGTCAATCG CTTCTGCCGT TCGTTCAGTG TCAGTGGCTA TCCGGAATTG AAGCTGCAAC TGGCCCAGAG CCTGGCCAGT GGCGCGGCCT ATGTCAGCCG TGCGGTGGAA GCCGATGATA ATCCGGAGGC CTATACCCAG AAGATTTTCG GCAGCGCCAT CGCGTCACTG GACAGCGCGT GCCAGCAATT GGACCCGGCT TTGATCAGCA AGTCTGTGGA CATGCTCATC CAGGCGCGGC AGATCCATTT TTTCGGGCTG GGTGCCTCCG CGCCGGTAGC CCTGGACGCG CAGCATAAAT TCTTTCGCTT CAATCTGGCG GTGACGGCGC ATGCCGATGT GCTGATGCAG CGGATGATTG CGTCGGTGGC TCATACCGGC GAGTTGTTCG TGATCATTTC GTATACGGGC CGTACCCGTG AGTTGGTGGA GGTGGCGCGT ATCGCGCGGG CCAACGGCGC GTCGGTGCTG GGGCTGACGG CAGCCGGCTC GCCGCTGGCC CAGGCCAGTA CGGTGAGTCT GAACATTCCT CTGCCGGAAG ATACGGATAT TTATATGCCG ATGACGTCGC GGATCATTCA GTTGACTGTG CTCGATGTGC TGGCCACGGG TATGACGCTG CGCCGCGGCG TCGATTTTCA GCCGCATTTG CGCAAGATCA AGGAAAGTCT GAATGACAGC CGTTATCCGA TCGAGGATCA GGGCTGA
|
Protein sequence | MDRVRNLLEQ IQGRLDELNK AERKVAEVIL LNPQMATRLS IAALAQAAKV SEPTVNRFCR SFSVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDNPEAYTQ KIFGSAIASL DSACQQLDPA LISKSVDMLI QARQIHFFGL GASAPVALDA QHKFFRFNLA VTAHADVLMQ RMIASVAHTG ELFVIISYTG RTRELVEVAR IARANGASVL GLTAAGSPLA QASTVSLNIP LPEDTDIYMP MTSRIIQLTV LDVLATGMTL RRGVDFQPHL RKIKESLNDS RYPIEDQG
|
| |