Gene Psyr_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1119 
Symbol 
ID3366613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1268157 
End bp1269023 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content60% 
IMG OID637651460 
ProductDNA-binding transcriptional regulator HexR 
Protein accessionYP_234211 
Protein GI66044370 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.942787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCG TAAGAAACCT CCTGGAGCAA ATCCAGGGCC GACTCGACGA GCTGAACAAG 
GCCGAACGCA AAGTGGCCGA AGTCATCCTG CTCAACCCGC AGATGGCCAC GCGGCTGAGC
ATTGCAGCGC TTGCCCAGGC CGCCAAGGTC AGCGAGCCGA CGGTCAATCG CTTCTGCCGT
TCGTTCAGTG TCAGTGGCTA TCCGGAATTG AAGCTGCAAC TGGCCCAGAG CCTGGCCAGT
GGCGCGGCCT ATGTCAGCCG TGCGGTGGAA GCCGATGATA ATCCGGAGGC CTATACCCAG
AAGATTTTCG GCAGCGCCAT CGCGTCACTG GACAGCGCGT GCCAGCAATT GGACCCGGCT
TTGATCAGCA AGTCTGTGGA CATGCTCATC CAGGCGCGGC AGATCCATTT TTTCGGGCTG
GGTGCCTCCG CGCCGGTAGC CCTGGACGCG CAGCATAAAT TCTTTCGCTT CAATCTGGCG
GTGACGGCGC ATGCCGATGT GCTGATGCAG CGGATGATTG CGTCGGTGGC TCATACCGGC
GAGTTGTTCG TGATCATTTC GTATACGGGC CGTACCCGTG AGTTGGTGGA GGTGGCGCGT
ATCGCGCGGG CCAACGGCGC GTCGGTGCTG GGGCTGACGG CAGCCGGCTC GCCGCTGGCC
CAGGCCAGTA CGGTGAGTCT GAACATTCCT CTGCCGGAAG ATACGGATAT TTATATGCCG
ATGACGTCGC GGATCATTCA GTTGACTGTG CTCGATGTGC TGGCCACGGG TATGACGCTG
CGCCGCGGCG TCGATTTTCA GCCGCATTTG CGCAAGATCA AGGAAAGTCT GAATGACAGC
CGTTATCCGA TCGAGGATCA GGGCTGA
 
Protein sequence
MDRVRNLLEQ IQGRLDELNK AERKVAEVIL LNPQMATRLS IAALAQAAKV SEPTVNRFCR 
SFSVSGYPEL KLQLAQSLAS GAAYVSRAVE ADDNPEAYTQ KIFGSAIASL DSACQQLDPA
LISKSVDMLI QARQIHFFGL GASAPVALDA QHKFFRFNLA VTAHADVLMQ RMIASVAHTG
ELFVIISYTG RTRELVEVAR IARANGASVL GLTAAGSPLA QASTVSLNIP LPEDTDIYMP
MTSRIIQLTV LDVLATGMTL RRGVDFQPHL RKIKESLNDS RYPIEDQG