Gene Psyr_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1039 
Symbol 
ID3366533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1174500 
End bp1175477 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content65% 
IMG OID637651382 
ProductFecR protein 
Protein accessionYP_234133 
Protein GI66044292 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.278865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGA ACAACGAGTC TTTAAACAAA TCCGACATCT CGCCTGCCGT GGCACAGCAG 
GCCGTTGGCT GGCTGCTGGA AATGCAGGAA GGCACGCTGG ATGCCCGCCG TCAGCACGCC
TGGCAGCTGT GGCTCAATGG CAACGCCGAG CACCAACGGG CATGGGCGCA CATGCAGCGG
GTCAACCAGC GCCTGAGTGG ACTGTCCTCG CCGCTGGCGC ATGCGGCACT CAATGCGCCG
AAGTCCGCCA GCCGTCGGCA TGCGCTCAAA CTGCTATTGC TGCTCGGCGC AGGCTCGGCA
GCGGGCTGGA GCCTGCGCGA GCAGATCGCC CGGCAACCCT TGCTGGCCGA TTACGACAGC
GGCGTGGGCG AACAACGCAA GGTGGCGTTG AGCGACGGCA GTCAGGTGCA GTTGAATACT
GCCAGCGCGG TGGATGTGCG TTTCGATGCG CAGCAGCGCC TGATCGAACT GCTGCAGGGC
GAAATCCTCA TGACGGCCTC GGCGGAAACG CGCCCGCTGA ACCTGTTGAG CGCGGAAGGC
ACGGTCAGGG CCTCTACCGG CGCCAGTCGT TTCAACCTGC GTCAACTGAA TGGGCGTACG
CAATTGGCCG TATTTGCCGG AGCCCTTGAA ATAGCCCCTG CCGGCAAGAG CGGAGCGGGC
TTGATGCTGC GCGCCAGCCA GCAGGTGACG TTCAGCCGCG ATGCCTGGGA CAAGGTTCGT
CCGCTGGACG CAGGCAGTGG TGCCTGGGCG GACGGGATGC TGGTGGCGTC GCGCATGAGG
CTGGCGGATT TTCTCGCAGA GTTGAGTCGC TACCGCCGCG GTCGTCTGAA TTGCGATGCG
AGGGTTGCAG GGCTGCTGAT TTCCGGCAGC TACCCGCTGG CCGACAGCGA GCGCATCCTC
GACATGCTCG AACTCGCCCT CCCGGTACGC GTGCAGCGCT TCACGCGGTA TTGGGTGAAC
GTGCAGGCGC GGGTTTGA
 
Protein sequence
MNPNNESLNK SDISPAVAQQ AVGWLLEMQE GTLDARRQHA WQLWLNGNAE HQRAWAHMQR 
VNQRLSGLSS PLAHAALNAP KSASRRHALK LLLLLGAGSA AGWSLREQIA RQPLLADYDS
GVGEQRKVAL SDGSQVQLNT ASAVDVRFDA QQRLIELLQG EILMTASAET RPLNLLSAEG
TVRASTGASR FNLRQLNGRT QLAVFAGALE IAPAGKSGAG LMLRASQQVT FSRDAWDKVR
PLDAGSGAWA DGMLVASRMR LADFLAELSR YRRGRLNCDA RVAGLLISGS YPLADSERIL
DMLELALPVR VQRFTRYWVN VQARV