Gene Psyr_1011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1011 
Symbol 
ID3366505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1145082 
End bp1146185 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content63% 
IMG OID637651354 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_234105 
Protein GI66044264 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAG AAGCCTTGTT CACGCCTTTC CGTCTGGGCA GCCTGGAGCT GTCCTCGCGT 
GTGGTCATGG CCCCCATGAC CCGCTCGTTC TCGCCAGGGC ACGTGCCCAA CTCGAAGGTC
GTCGAGTACT ACCGGCGGCG CGCTGCTGCA GGCGTCGGGC TGATTATCAC CGAAGGTACG
ACGGTCAATC ACAAGGCCTC CAACGGTTAT CCGAACGTCC CGCAGTTTTT CGGCGAAGCG
CCGCTGGCCG GCTGGCGCAA GGTGGTCGAG GCGGTGCATG CGGAGGGCGG CAAGATTGTT
CCGCAACTCT GGCACGTCGG CGCAGTTCGC CGTCCTGGCA CCGAGCCGGA CGGCAGCGTG
CCTGCCTACG GGCCGATGGA GAAGGTCAAG GACGGTCAGG TGCTGGTGCA TGGCATGAGC
AAGCAGGACA TCGACGAGGT CGTAGCGGCC TTTGCCCAGG CTGCCGCCGA TGCCAGGGCG
ATTGGCATGG ACGGTGTCGA AATTCATGGG GCTCACGGTT ACCTGGTCGA TCAGTTCTTT
TGGGAGGGCA GCAATCAGCG TAGCGACGAG TACGGCGGCA GCCTCGCCAA CCGCTCACGG
TTTGCCCTCG AACTGATCAA GGCCGTGCGC GGCGCAGTAG GCCCGGACTA CCCGATCATT
TTCCGTTTCT CACAATGGAA ACAGCAGGAT TACACCGCGC GCCTGGTGCA AACGCCCGAG
GCGCTGGGCG AGTTCCTGCA GCCTCTGGCT GATGCAGGTG TGGATATCTT TCATTGCTCT
ACCCGGCGTT TCTGGGAGCC TGAGTTTGAA GGCTCCGACC TGAACCTGGC GGGCTGGACG
CGCAAGCTGA CCGGCAAACC GACCATTACT GTCGGCAGCG TCGGACTGGA CGGCGAGTTC
CTGCAATTCA TGGTCAACAC CGACAAGGTC GCTCAACCGG CCAGCCTGGA AAATCTGCTG
AAGCGACTGG GCAACGACGA GTTCGATCTG GTGGCGGTGG GGCGCGCGCT GCTGGTCGAT
CCTGATTGGG CACTGAAAGT GCGCGAGGGG CGCGAGCAGG ATATCCTGCC CTTCAGTCGA
GACGCACTGA CGACACTGGT CTGA
 
Protein sequence
MSAEALFTPF RLGSLELSSR VVMAPMTRSF SPGHVPNSKV VEYYRRRAAA GVGLIITEGT 
TVNHKASNGY PNVPQFFGEA PLAGWRKVVE AVHAEGGKIV PQLWHVGAVR RPGTEPDGSV
PAYGPMEKVK DGQVLVHGMS KQDIDEVVAA FAQAAADARA IGMDGVEIHG AHGYLVDQFF
WEGSNQRSDE YGGSLANRSR FALELIKAVR GAVGPDYPII FRFSQWKQQD YTARLVQTPE
ALGEFLQPLA DAGVDIFHCS TRRFWEPEFE GSDLNLAGWT RKLTGKPTIT VGSVGLDGEF
LQFMVNTDKV AQPASLENLL KRLGNDEFDL VAVGRALLVD PDWALKVREG REQDILPFSR
DALTTLV