Gene Psyr_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1002 
Symbol 
ID3366496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1135794 
End bp1137305 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content65% 
IMG OID637651345 
ProductABC transporter 
Protein accessionYP_234096 
Protein GI66044255 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG TCAATGCGCT GCAACTCACC GGCATCAGCA AATCGTTCGA TGGCTTCAAG 
GCGCTGATCG ACGCCGACTT CACCGCCTGT TGGGGGGAAG TGCACGCGCT GCTGGGCGAG
AACGGTGCAG GCAAGTCCTC GCTGATGAAC ATCGCCGCCG GGCTGTATGC ACCGGAAACC
GGCACCCTGC TGCTGGACGA CAATCCGGTT CAGCTTCAGG GCCCGAGGGA CGCCAGCCGC
TACCGGATCG GCATGGTTCA CCAGCACTTC AAGCTGGTGA AACCGTTCAC GGTGGCGCAG
AACATTCTCC TGGCACTGCC CGAGCAACCC GGTGAAGGCA GCTATCGCAA GCGGCTGCGT
GCGCTGGAAC AGGAAATTGT CGGCAAGGCC GAGACGCTGG GTTTTGCGAT TGACCCGGCG
CGCACCGTCG ACAGCCTGTC GGTCGCCGAG CAGCAGCGCG TCGAGATTCT CAAGGTGCTG
CTGGCCGGTG CGCGGATTCT GATCCTCGAC GAGCCGACGG CAGTGCTGAC CGATCAGGAA
GCCGAGCGTC TGCTGCTGAC CGTTCAGGCA TTCGCCCGGC AGGGTGCGGC GGTGGTTCTG
GTTACGCACA AGATGGCTGA CGTCAAACGC TATGCCGACC GGGTAACGGT CATGCGCGGC
GGGCGCACGA TACAGACCCT TGATCCGCAG CGTGTCAGCG TCGAGCAACT GGTGCAGTTG
ACGGTGGGCG AATCGGTGCC GGTTGCCGAG CATCAACCGG CGACACCCGG TGAGGTGCGT
TTGCAGGTCA AGGAGTTGCG CAGCGTCGGC AGCAGTACGC TCAACGGCGT CAACCTGACC
CTGCACGCCG GGCAGATTTA CGGCATCGCA GGCGTGGGTG GCAATGGTCA GGCAGAGCTG
GCCAACGCGC TGATGGGGCT GGCGCAAGCG ACCGAGGGTG AAATCCACAT GGCCGGGTTT
GGCGATTTGC GCGACGCGTC GGCCGATCAG CGTCGGCAGT TGCGCATCGC CTCGATCCCG
GCCGACCGCT ACGGCGCGGC GCTGGCCGGG TCGCTGTCGG TGGCCGAGAA CTTTGCTATC
GGCAATATCC ACAGCGGGCA GTACGGCTCT TTCTGGCGTC TGGGCTACAA GCGCCTGAAA
CAGGATGCAC AGCGCGCCGT GGCGGACTTC GACGTACAAG GCGTGCGCTC TCTCGATCAG
AAAGCTGCGC TGTTGTCGGG AGGCAACGCA CAGAAACTGG TGATCGCCCG CGAATTCAGC
CGCGACCCGC AATTGGTGCT GGTGCACAGC CCGAGCCGCG GCCTGGATGT GCGTGCCACC
CAGGCGGTGC ACGCCCGTTT GCGAGCAGCA CGGGACGCGG GTGCTGCGGT GCTGGTGATC
AGCGAGGATC TGGACGAGGT ATTGGCCCTG GCTGACCGTG TTGGCGTGAT GAACGGCGGG
CGCATCGTCG CCGAGTTCGC GCACCCTGCC GACCGGCAAG CCATCGGCAA AGCGATGGTG
AGCCATGACT GA
 
Protein sequence
MSQVNALQLT GISKSFDGFK ALIDADFTAC WGEVHALLGE NGAGKSSLMN IAAGLYAPET 
GTLLLDDNPV QLQGPRDASR YRIGMVHQHF KLVKPFTVAQ NILLALPEQP GEGSYRKRLR
ALEQEIVGKA ETLGFAIDPA RTVDSLSVAE QQRVEILKVL LAGARILILD EPTAVLTDQE
AERLLLTVQA FARQGAAVVL VTHKMADVKR YADRVTVMRG GRTIQTLDPQ RVSVEQLVQL
TVGESVPVAE HQPATPGEVR LQVKELRSVG SSTLNGVNLT LHAGQIYGIA GVGGNGQAEL
ANALMGLAQA TEGEIHMAGF GDLRDASADQ RRQLRIASIP ADRYGAALAG SLSVAENFAI
GNIHSGQYGS FWRLGYKRLK QDAQRAVADF DVQGVRSLDQ KAALLSGGNA QKLVIAREFS
RDPQLVLVHS PSRGLDVRAT QAVHARLRAA RDAGAAVLVI SEDLDEVLAL ADRVGVMNGG
RIVAEFAHPA DRQAIGKAMV SHD