Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1002 |
Symbol | |
ID | 3366496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1135794 |
End bp | 1137305 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637651345 |
Product | ABC transporter |
Protein accession | YP_234096 |
Protein GI | 66044255 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGG TCAATGCGCT GCAACTCACC GGCATCAGCA AATCGTTCGA TGGCTTCAAG GCGCTGATCG ACGCCGACTT CACCGCCTGT TGGGGGGAAG TGCACGCGCT GCTGGGCGAG AACGGTGCAG GCAAGTCCTC GCTGATGAAC ATCGCCGCCG GGCTGTATGC ACCGGAAACC GGCACCCTGC TGCTGGACGA CAATCCGGTT CAGCTTCAGG GCCCGAGGGA CGCCAGCCGC TACCGGATCG GCATGGTTCA CCAGCACTTC AAGCTGGTGA AACCGTTCAC GGTGGCGCAG AACATTCTCC TGGCACTGCC CGAGCAACCC GGTGAAGGCA GCTATCGCAA GCGGCTGCGT GCGCTGGAAC AGGAAATTGT CGGCAAGGCC GAGACGCTGG GTTTTGCGAT TGACCCGGCG CGCACCGTCG ACAGCCTGTC GGTCGCCGAG CAGCAGCGCG TCGAGATTCT CAAGGTGCTG CTGGCCGGTG CGCGGATTCT GATCCTCGAC GAGCCGACGG CAGTGCTGAC CGATCAGGAA GCCGAGCGTC TGCTGCTGAC CGTTCAGGCA TTCGCCCGGC AGGGTGCGGC GGTGGTTCTG GTTACGCACA AGATGGCTGA CGTCAAACGC TATGCCGACC GGGTAACGGT CATGCGCGGC GGGCGCACGA TACAGACCCT TGATCCGCAG CGTGTCAGCG TCGAGCAACT GGTGCAGTTG ACGGTGGGCG AATCGGTGCC GGTTGCCGAG CATCAACCGG CGACACCCGG TGAGGTGCGT TTGCAGGTCA AGGAGTTGCG CAGCGTCGGC AGCAGTACGC TCAACGGCGT CAACCTGACC CTGCACGCCG GGCAGATTTA CGGCATCGCA GGCGTGGGTG GCAATGGTCA GGCAGAGCTG GCCAACGCGC TGATGGGGCT GGCGCAAGCG ACCGAGGGTG AAATCCACAT GGCCGGGTTT GGCGATTTGC GCGACGCGTC GGCCGATCAG CGTCGGCAGT TGCGCATCGC CTCGATCCCG GCCGACCGCT ACGGCGCGGC GCTGGCCGGG TCGCTGTCGG TGGCCGAGAA CTTTGCTATC GGCAATATCC ACAGCGGGCA GTACGGCTCT TTCTGGCGTC TGGGCTACAA GCGCCTGAAA CAGGATGCAC AGCGCGCCGT GGCGGACTTC GACGTACAAG GCGTGCGCTC TCTCGATCAG AAAGCTGCGC TGTTGTCGGG AGGCAACGCA CAGAAACTGG TGATCGCCCG CGAATTCAGC CGCGACCCGC AATTGGTGCT GGTGCACAGC CCGAGCCGCG GCCTGGATGT GCGTGCCACC CAGGCGGTGC ACGCCCGTTT GCGAGCAGCA CGGGACGCGG GTGCTGCGGT GCTGGTGATC AGCGAGGATC TGGACGAGGT ATTGGCCCTG GCTGACCGTG TTGGCGTGAT GAACGGCGGG CGCATCGTCG CCGAGTTCGC GCACCCTGCC GACCGGCAAG CCATCGGCAA AGCGATGGTG AGCCATGACT GA
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Protein sequence | MSQVNALQLT GISKSFDGFK ALIDADFTAC WGEVHALLGE NGAGKSSLMN IAAGLYAPET GTLLLDDNPV QLQGPRDASR YRIGMVHQHF KLVKPFTVAQ NILLALPEQP GEGSYRKRLR ALEQEIVGKA ETLGFAIDPA RTVDSLSVAE QQRVEILKVL LAGARILILD EPTAVLTDQE AERLLLTVQA FARQGAAVVL VTHKMADVKR YADRVTVMRG GRTIQTLDPQ RVSVEQLVQL TVGESVPVAE HQPATPGEVR LQVKELRSVG SSTLNGVNLT LHAGQIYGIA GVGGNGQAEL ANALMGLAQA TEGEIHMAGF GDLRDASADQ RRQLRIASIP ADRYGAALAG SLSVAENFAI GNIHSGQYGS FWRLGYKRLK QDAQRAVADF DVQGVRSLDQ KAALLSGGNA QKLVIAREFS RDPQLVLVHS PSRGLDVRAT QAVHARLRAA RDAGAAVLVI SEDLDEVLAL ADRVGVMNGG RIVAEFAHPA DRQAIGKAMV SHD
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