Gene Psyr_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0958 
Symbol 
ID3366452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1092194 
End bp1093441 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content61% 
IMG OID637651301 
Productamine oxidase, flavin-containing 
Protein accessionYP_234052 
Protein GI66044211 
COG category[R] General function prediction only 
COG ID[COG2907] Predicted NAD/FAD-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CAGTCATTGG CAGCGGGATT TCTGGCCTGA CCAGTGCCTA CCTGCTCAAC 
CGCGCGCATG AGGTGACCGT GTTCGAGTCT TCGGACTGGA TCGGCGGGCA TACTCACACG
GTGGATGTGC AGGTCGAAGG CCGCGCCTAC GCGATCGACA CCGGTTTCAT TGTCTTCAAC
GACTGGACCT ACCCCAATTT CATTCGCCTG CTAGGCCAGC TGGGTGTCGG CTTCCAGCCT
GCGGAAATGA GTTTTTCGGT ACATGATCCG CGTACTGGCG TGGAATATAA CGGCAACAAC
CTCAACAGCC TGTTCGCCCA GCGCAGCAAC CTGCTGTCGC CGCGGTTCTG GGGCATGCTG
CGCGATATCC TGCGCTTCAA TCGTCAATCG GTCGATGATC TGGAAAACCA GCGCATCGCG
GCAGACACCA CGCTGGGCGA GTACCTGAAG AACGGCGGTT ATGGCCAGCG CTTCATCGAT
CATTACATCG TGCCCATGGG CGCGGCGATC TGGTCGATGT CGCTGGCCGA CATGCTCGGC
TTCCCGCTGC AGTTCTTCGT GCGCTTTTTC AAGAATCACG GCCTGCTCTC GGTCACTCAT
CGGCCGCAAT GGTGCGTGAT CGAAGGCGGT TCCAGAAGTT ATGTGGAACC GCTGACAGCC
TCGTTCCGCG AGCGCATTCG TCTGTCCTGC CCGGTCACAC GTGTCGAGCG TGACAGCGAA
GGTGTGACGC TGCACAGCGC CATGGGCAGC GAACGTTTCG ACAAGGTGGT GTTTGCCTGT
CACAGCGATC AGGCCCTGGC CCTGCTGGCA CAGCCATCGA ATGCCGAGCA GTCGATTCTC
GGCGCGCTGC GCTATGCCGA AAACGATGTG GTGCTGCACA CCGACACGCG ACTGCTGCCC
AAGCGCAAAC TGGCCTGGGC GAGCTGGAAC TATCGCCTGG GCGGCGGCGA ACAGCAGTCG
GCCGCCGTCA CCTATGACAT GAACATTCTG CAAGGGATCG AGAGCGACAC GACGTTCTGC
GTCAGCCTCA ACCAGACTGC GGCCATCGAC CCGGCCAAAA TCCTTGGCCG CTACCGCTAT
GCCCATCCGC AATACAGCCT CGATGCGATC GCTGCACAGG CGCGCTGGGA GGAAATCAAC
GGTGTCGACC ACACCTGGTA CTGCGGCGCC TACTGGGCCA ATGGCTTTCA CGAAGACGGC
GTGGTCAGCG GCCTGCGTGT CGCCCAGGCC TTTGGTGAAA CGCTGTGA
 
Protein sequence
MKIAVIGSGI SGLTSAYLLN RAHEVTVFES SDWIGGHTHT VDVQVEGRAY AIDTGFIVFN 
DWTYPNFIRL LGQLGVGFQP AEMSFSVHDP RTGVEYNGNN LNSLFAQRSN LLSPRFWGML
RDILRFNRQS VDDLENQRIA ADTTLGEYLK NGGYGQRFID HYIVPMGAAI WSMSLADMLG
FPLQFFVRFF KNHGLLSVTH RPQWCVIEGG SRSYVEPLTA SFRERIRLSC PVTRVERDSE
GVTLHSAMGS ERFDKVVFAC HSDQALALLA QPSNAEQSIL GALRYAENDV VLHTDTRLLP
KRKLAWASWN YRLGGGEQQS AAVTYDMNIL QGIESDTTFC VSLNQTAAID PAKILGRYRY
AHPQYSLDAI AAQARWEEIN GVDHTWYCGA YWANGFHEDG VVSGLRVAQA FGETL