Gene Psyr_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0759 
Symbol 
ID3366246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp864581 
End bp865723 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content61% 
IMG OID637651098 
ProductABC transporter:TOBE 
Protein accessionYP_233855 
Protein GI66044014 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00374684 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA AGCTAGACAA CATCAACAAG CAATTGGGCG GCACGCGTAT TCTGCGCGAC 
GTCAGCCTGG AGATCGCTGC CGGTGAGTTC GTTGTGTTCG TCGGCCCGTC GGGCTGCGGA
AAGTCGACGC TGCTGCGCTT GATCGCCGGC CTGGATTCGA TCTGTGCTGG CGACCTGCTG
ATCGACGGAC GACGGGTCAA TGACCTGGAA CCACGCGAGC GTGGTGTCGG TATGGTCTTT
CAGTCCTACG CCCTGTACCC GCACATGAGC GTCTACGACA ACATCAGTTT CGGCCTCAAG
CTGGCCAAGA CGGAAAAAAG CAGCCTGCGC GAACGCGTGC TGAAAACCGC GCAGATCCTG
CAACTGGACA AACTGCTGCA GCGCAAGCCC AGGGAACTGT CCGGCGGGCA GCGCCAGCGT
GTGGCCATGG GCCGAGCCAT GGCGCGGGAA CCGGACATCC TGTTGTTCGA TGAACCGCTT
TCCAACCTGG ATGCCTCGTT GCGGGTTCAG ATGCGCAACG AAATCGCCCG CCTCCACAAG
CGGCTGGGCT CGACGATGAT CTACGTCACC CACGATCAGG TAGAGGCGAT GACCCTGGCG
GACAAGATTG TCGTACTCAA CGGCGGTCAG GTCGAACAGG TCGGCTCACC ACGCGAACTC
TACGAGCGTC CTGCCAGCCT CTTCGTCGCC GGTTTTCTGG GCTCGCCAAG AATGAATTTT
CTGCCCGTGA GCTTGCAGGC ACCGGGTCGC AGCAGCCTGA TCGATATCCC GGCACTGGGC
ATGAAATCCC TGCCCTTCGA CAGCTCGAAT CTGACCGAGG ATGCGCAACT GACCTTGGGT
GTGCGCCCGG AGCACATCAC CCTCAATGCT GCGAACAACG GCGTTGGCGT CACGGTATCC
GGTGTCGAAT ACCTGGGCAG CGAGGTCTAT GTGCACCTGG CTACCGGCGC GAGCGAGCCC
TTGATTTGTC GCTGCGATGC CAAGGCTGGC TGGCAGGTGG GTGACCAGGT CGCGCTGCAA
TTCGACGACA GCAACCTGCA CCTGTTCGAC GCCGATGGCC TGGCCCTGAA GCGCCACACA
GACGCCAGTC AACACCTGAC ACCCGGCACC ACACCGCACC TCGTACAAGC AGGCACCCTA
TGA
 
Protein sequence
MKLKLDNINK QLGGTRILRD VSLEIAAGEF VVFVGPSGCG KSTLLRLIAG LDSICAGDLL 
IDGRRVNDLE PRERGVGMVF QSYALYPHMS VYDNISFGLK LAKTEKSSLR ERVLKTAQIL
QLDKLLQRKP RELSGGQRQR VAMGRAMARE PDILLFDEPL SNLDASLRVQ MRNEIARLHK
RLGSTMIYVT HDQVEAMTLA DKIVVLNGGQ VEQVGSPREL YERPASLFVA GFLGSPRMNF
LPVSLQAPGR SSLIDIPALG MKSLPFDSSN LTEDAQLTLG VRPEHITLNA ANNGVGVTVS
GVEYLGSEVY VHLATGASEP LICRCDAKAG WQVGDQVALQ FDDSNLHLFD ADGLALKRHT
DASQHLTPGT TPHLVQAGTL