Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0759 |
Symbol | |
ID | 3366246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 864581 |
End bp | 865723 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651098 |
Product | ABC transporter:TOBE |
Protein accession | YP_233855 |
Protein GI | 66044014 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00374684 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGA AGCTAGACAA CATCAACAAG CAATTGGGCG GCACGCGTAT TCTGCGCGAC GTCAGCCTGG AGATCGCTGC CGGTGAGTTC GTTGTGTTCG TCGGCCCGTC GGGCTGCGGA AAGTCGACGC TGCTGCGCTT GATCGCCGGC CTGGATTCGA TCTGTGCTGG CGACCTGCTG ATCGACGGAC GACGGGTCAA TGACCTGGAA CCACGCGAGC GTGGTGTCGG TATGGTCTTT CAGTCCTACG CCCTGTACCC GCACATGAGC GTCTACGACA ACATCAGTTT CGGCCTCAAG CTGGCCAAGA CGGAAAAAAG CAGCCTGCGC GAACGCGTGC TGAAAACCGC GCAGATCCTG CAACTGGACA AACTGCTGCA GCGCAAGCCC AGGGAACTGT CCGGCGGGCA GCGCCAGCGT GTGGCCATGG GCCGAGCCAT GGCGCGGGAA CCGGACATCC TGTTGTTCGA TGAACCGCTT TCCAACCTGG ATGCCTCGTT GCGGGTTCAG ATGCGCAACG AAATCGCCCG CCTCCACAAG CGGCTGGGCT CGACGATGAT CTACGTCACC CACGATCAGG TAGAGGCGAT GACCCTGGCG GACAAGATTG TCGTACTCAA CGGCGGTCAG GTCGAACAGG TCGGCTCACC ACGCGAACTC TACGAGCGTC CTGCCAGCCT CTTCGTCGCC GGTTTTCTGG GCTCGCCAAG AATGAATTTT CTGCCCGTGA GCTTGCAGGC ACCGGGTCGC AGCAGCCTGA TCGATATCCC GGCACTGGGC ATGAAATCCC TGCCCTTCGA CAGCTCGAAT CTGACCGAGG ATGCGCAACT GACCTTGGGT GTGCGCCCGG AGCACATCAC CCTCAATGCT GCGAACAACG GCGTTGGCGT CACGGTATCC GGTGTCGAAT ACCTGGGCAG CGAGGTCTAT GTGCACCTGG CTACCGGCGC GAGCGAGCCC TTGATTTGTC GCTGCGATGC CAAGGCTGGC TGGCAGGTGG GTGACCAGGT CGCGCTGCAA TTCGACGACA GCAACCTGCA CCTGTTCGAC GCCGATGGCC TGGCCCTGAA GCGCCACACA GACGCCAGTC AACACCTGAC ACCCGGCACC ACACCGCACC TCGTACAAGC AGGCACCCTA TGA
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Protein sequence | MKLKLDNINK QLGGTRILRD VSLEIAAGEF VVFVGPSGCG KSTLLRLIAG LDSICAGDLL IDGRRVNDLE PRERGVGMVF QSYALYPHMS VYDNISFGLK LAKTEKSSLR ERVLKTAQIL QLDKLLQRKP RELSGGQRQR VAMGRAMARE PDILLFDEPL SNLDASLRVQ MRNEIARLHK RLGSTMIYVT HDQVEAMTLA DKIVVLNGGQ VEQVGSPREL YERPASLFVA GFLGSPRMNF LPVSLQAPGR SSLIDIPALG MKSLPFDSSN LTEDAQLTLG VRPEHITLNA ANNGVGVTVS GVEYLGSEVY VHLATGASEP LICRCDAKAG WQVGDQVALQ FDDSNLHLFD ADGLALKRHT DASQHLTPGT TPHLVQAGTL
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