Gene Psyr_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0643 
Symbol 
ID3366121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp730452 
End bp731312 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content64% 
IMG OID637650985 
ProductMaoC-like dehydratase 
Protein accessionYP_233751 
Protein GI66043910 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGG CTCACTGGCG CTACCTCAAT TCCCTGCAGC CCCTGTCCAA CCTGTTCATC 
CAGGCAGCGC TCAGGCGCAA GGTCACCGGG ATGCAGCTAC CCGATCTGGG CTTGCGCAGC
TGGATCGCGG TCGATACCGA CAAGCTTGAA GCGTACCGCA AGGTCTGCGG ATTCGAAGAG
AGCAGCCTGC TGCCTCCGAC CTATCCGCAC GTGCTGGCGT TTCCGTTGCA AATGCAATTG
ATGACCTCCG AAGACTTTCC GTTTCCGCTG CTGGGGCTGA TTCACCTGGC CAATCGCACC
CGCACGCATC GTCCACTGGG CGGGGTGAGC CAGTTGTACA TCAGCGTTCA GGCCACCGAT
CTGCGCCCGC ATGCCAAGGG GGCGACGTTC ACCCTGGTCA CCCAGGCCGA AGACGGCATG
GGGCTGTTGT GGGAAGAAGA AAGCACCCTG CTGTGCACCG CCGTGCATCT GGAAGACAGC
CCGGTGAGCT ATCCGGAAGC CGAGCCGCTA CCGCTCAGCG AACTGCAACA CTGGCGGGCG
ACGGCACAGA TAGGCCGCGA GTACGCCAAG GTGTCGGGCG ACTACAACCC GATTCACCTC
AGCGCCCCCA GCGCCAGGCT GTTCGGTTTC CCTCGCGCCA TTGCCCACGG CATGTGGCTC
AAGGCCCGTG CGCTCGCGGC GCTGGGCGAG CACTTGCCGG CCTCGAATGT CGAGATCAGC
GTGCAGTTCC AGAAGCCTGT ACGCCTGCCT GCCGACGTGA CGCTGTTGGC CAGCGCCGCC
GGCTCGCAGG GCCAGTTCCG TGTCGAGGGC CAGGAGGGTA TCGTGCATAT GGTCGGTAGC
TGGCAGCCTG TCAGCGAGTG A
 
Protein sequence
MMTAHWRYLN SLQPLSNLFI QAALRRKVTG MQLPDLGLRS WIAVDTDKLE AYRKVCGFEE 
SSLLPPTYPH VLAFPLQMQL MTSEDFPFPL LGLIHLANRT RTHRPLGGVS QLYISVQATD
LRPHAKGATF TLVTQAEDGM GLLWEEESTL LCTAVHLEDS PVSYPEAEPL PLSELQHWRA
TAQIGREYAK VSGDYNPIHL SAPSARLFGF PRAIAHGMWL KARALAALGE HLPASNVEIS
VQFQKPVRLP ADVTLLASAA GSQGQFRVEG QEGIVHMVGS WQPVSE