| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0621 |
|---|
| Symbol | |
|---|
| ID | 3366099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 711095 |
|---|
| End bp | 711946 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637650963 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233729 |
|---|
| Protein GI | 66043888 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.218672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.707769 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGAGTT ACCGCCTCGG TCGAAAACGC TTGGGCGGTA TCCTTGCCGT TGTGGTGGCG
CTGCTGTTGA GCGGTGCCAT TTCCGGTTGT CAGTCGCCGC GCGCTGATCT ACAGCAATTG
GCGGAACAGC ATGGCCGACG GATGCAGATT CTGTCGGCTC AGCCCCTTCC ACTGGCGGCG
CTATTACCGC CAGAGACTTT CAGGACGAAC CGTCTGCGAG TCTATCTGGA AGGCGACGGT
CATGCCTGGG CCACCGCCAC TCAACCCAGT CTCGACCCGA GCCCACGTAA GCTGCTCGTG
GCGCGGTTGG CAATCAACGA CCCCTCTCCC AGCGCCTATC TTGCGCGACC TTGTCAATTC
ATCATGGGCC CGGCCTGCAA CTCTGCACTC TGGACCAGTC GCCGCTTCTC CCAGGAAGTG
GTCACCAGCC TCAGCAGCGC GCTGGACCAT ATGAAACAAC GTTACGGTAA TAACGAGTTC
GAGCTGATTG GTTATTCAGG TGGCGCAACC CTCGCGTTGC TGCTGGCTGG ACAACGAAAC
GACATCACCC GGATCCAGAC CATCGCAGGC AATCTCGCCC CGAATCAGTG GACCCAGCTA
AAAGGACTTT CGCCTCTCAC TGGATCGTTG GACCCACTCG ATTACATTCA GCGCCTGGCC
TTGATACCCC AGCGTCACTT GTCGGGAGCG CGTGACGAAA TGATCCCGAC TGAACTGGCA
AAGGGTTACA CCAGGCAACT GGGCAACGGT GCGTGCAGCC AGCTGATTAT CCTCTCGGGA
CCGAGTCACG AAGACGGGTG GGAAGAGGTC TGGACGCTGT GGAGAGGGCG GGACTTAGAA
GTCTGTCCGT GA
|
|---|
| Protein sequence | MWSYRLGRKR LGGILAVVVA LLLSGAISGC QSPRADLQQL AEQHGRRMQI LSAQPLPLAA
LLPPETFRTN RLRVYLEGDG HAWATATQPS LDPSPRKLLV ARLAINDPSP SAYLARPCQF
IMGPACNSAL WTSRRFSQEV VTSLSSALDH MKQRYGNNEF ELIGYSGGAT LALLLAGQRN
DITRIQTIAG NLAPNQWTQL KGLSPLTGSL DPLDYIQRLA LIPQRHLSGA RDEMIPTELA
KGYTRQLGNG ACSQLIILSG PSHEDGWEEV WTLWRGRDLE VCP
|
|---|
| |