Gene Psyr_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0619 
Symbol 
ID3366097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp707581 
End bp708624 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content57% 
IMG OID637650961 
ProductWavE lipopolysaccharide synthesis 
Protein accessionYP_233727 
Protein GI66043886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.693869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATC TTGTGGCCGT CGATTCCAGA AAAATCAGCG TGGTTATTCA GGGCCCCCTG 
TATCGCAACC TGAGTTCCAA ACGAAATATC TTCGTCTGCA TCGCGTCGAT CCGGACGCAC
CTGCCAGATG CCGAAATCAT CGTTTCGACC TGGCGTCATG AAGATACGTC CGGTGTGAAG
GCGGACCAGA TCGTCATGTC GGATGATCCG GGTGCCTTCG TCGATGACGC CGGTAATCAG
ATCAACATCA ATCGCATGCT GCGATCGACG TTATGCGGTA TTCAGAGCGC TTCAAGACCC
TATGTCATGA AAATGCGCGC CGATCACAAC CTGACCAGCG CTGCACTGGC CGTCATAGGC
CAGTCTGATG ATACCGAGCC GGGCGAGACA CAACTGTTCG ACACGCCCAT CACTACCACG
ACGCTTTATA TTCGCGACCC TGAACGGTTG CCGATGTTGT TCCATATATC GGATCTCGTT
CAATTCGGCA CGCGCAATGC GATGCTCGCC ATGTGGGAGC AACCCCTGTT CGAAAGGGAC
GCGCTGTTCA ACGACCGGCC GTCTCGCAAC CCGTTTGGCA ACTTCATTGG CTACACGTCC
GCGCGCCTGG TCAGCGAACA GGCACTGATG CTGGGTGTCA TGCACAGGAA GGGCATCGAC
GCCCGGCTCG CACGACCCTG CGAAGTAGGG CTGAGCAACC TGAAATTATG GGACAACGTC
TTGAGACGCA ACTTCAGAGT CCTCAACCAC TGCGAGGCTG GCGTCGACTT CCCGGAACGC
TTTCTGACCA GCCGCCGCGT ACTGACGACG CTCTACAAAG CTTCTGCGAT AGAGCAATTG
CAAAGGCTCG ACCCGCAGGG CTACAGGCTG AGAATTGCGC GCATCTGGCT CAATCAATAC
CTGCTGACCT GCCTGCGCCC CGGCTGGTGG GTGTCCTTTG CGACCATCGT ACTGTTCAGC
ACCTCGCCGA CCCTCGCCAA GCGCATTCGC TCGTACTGGC GCACGCTGAG GAAGGTCGCG
CATGCGGAGT CTTATCGGGT CTAG
 
Protein sequence
MPHLVAVDSR KISVVIQGPL YRNLSSKRNI FVCIASIRTH LPDAEIIVST WRHEDTSGVK 
ADQIVMSDDP GAFVDDAGNQ ININRMLRST LCGIQSASRP YVMKMRADHN LTSAALAVIG
QSDDTEPGET QLFDTPITTT TLYIRDPERL PMLFHISDLV QFGTRNAMLA MWEQPLFERD
ALFNDRPSRN PFGNFIGYTS ARLVSEQALM LGVMHRKGID ARLARPCEVG LSNLKLWDNV
LRRNFRVLNH CEAGVDFPER FLTSRRVLTT LYKASAIEQL QRLDPQGYRL RIARIWLNQY
LLTCLRPGWW VSFATIVLFS TSPTLAKRIR SYWRTLRKVA HAESYRV