Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0615 |
Symbol | |
ID | 3366093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 704107 |
End bp | 704829 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637650957 |
Product | hypothetical protein |
Protein accession | YP_233723 |
Protein GI | 66043882 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.651829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATATCA TCCTTCTGAC CGGCAGGCAG TCAGAGGCGC TGCCCGATGA GGGTGAGTAC CCGCACTACC TGTGCGAATA CAACGGCAAG CCACTGATTC ATACACTGAT AGACAACTGT GCGGTACTTC AGCCGCGCAG GATGATCTGC ACATTCTCGA ACAACGATAT CGCACGGCTG CACCTTCGCA ACATGGTTCC GCAGATGCAC CCGTCGGCCA GTGTTCTAGC GGTTCACAAC ATCACCCGCG GCGCGGCGTG CACGGCGCTT CTGGCGAGCG AAGACATCGA CAACGATGAC GAATTGCTGA TTCTCAGTGT CAGCGACTTC CTGGATATCG AGCTGCAGGA TGTAGTGCGC ACGTTTCGGC AAAGTCATGA GGATGCCGGA GTGGTCATCT TCAATTCTCT GCACCCTCGT TATTCATTCG CGCGCCTGGA TAGCGACTGC CGGGTTATCG AAGCTGCCGA AAAAAATCCG ATCAGCTCAA ACGCCATTGC AGGTGTGTAC TGGTTCAAGT CCGGCTCGCT GTTCGTATCG GCGGCCAAAG AAATGATTCG CAAGGACGCC AGGGTCAATG ACAACTTCTA CATAGCCCCC GCTCTCAATG AGCTGGTGCT GTTGCAGAAG AGGATCGGCG CCTACCGGAT CGAACCCAAT CAGTACCGGC CACTGAAAAC CGACAGTCAG CTCCACGCTT TCGAAGCAGG AGAAATGCGA TGA
|
Protein sequence | MNIILLTGRQ SEALPDEGEY PHYLCEYNGK PLIHTLIDNC AVLQPRRMIC TFSNNDIARL HLRNMVPQMH PSASVLAVHN ITRGAACTAL LASEDIDNDD ELLILSVSDF LDIELQDVVR TFRQSHEDAG VVIFNSLHPR YSFARLDSDC RVIEAAEKNP ISSNAIAGVY WFKSGSLFVS AAKEMIRKDA RVNDNFYIAP ALNELVLLQK RIGAYRIEPN QYRPLKTDSQ LHAFEAGEMR
|
| |