Gene Psyr_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0615 
Symbol 
ID3366093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp704107 
End bp704829 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content55% 
IMG OID637650957 
Producthypothetical protein 
Protein accessionYP_233723 
Protein GI66043882 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.651829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATATCA TCCTTCTGAC CGGCAGGCAG TCAGAGGCGC TGCCCGATGA GGGTGAGTAC 
CCGCACTACC TGTGCGAATA CAACGGCAAG CCACTGATTC ATACACTGAT AGACAACTGT
GCGGTACTTC AGCCGCGCAG GATGATCTGC ACATTCTCGA ACAACGATAT CGCACGGCTG
CACCTTCGCA ACATGGTTCC GCAGATGCAC CCGTCGGCCA GTGTTCTAGC GGTTCACAAC
ATCACCCGCG GCGCGGCGTG CACGGCGCTT CTGGCGAGCG AAGACATCGA CAACGATGAC
GAATTGCTGA TTCTCAGTGT CAGCGACTTC CTGGATATCG AGCTGCAGGA TGTAGTGCGC
ACGTTTCGGC AAAGTCATGA GGATGCCGGA GTGGTCATCT TCAATTCTCT GCACCCTCGT
TATTCATTCG CGCGCCTGGA TAGCGACTGC CGGGTTATCG AAGCTGCCGA AAAAAATCCG
ATCAGCTCAA ACGCCATTGC AGGTGTGTAC TGGTTCAAGT CCGGCTCGCT GTTCGTATCG
GCGGCCAAAG AAATGATTCG CAAGGACGCC AGGGTCAATG ACAACTTCTA CATAGCCCCC
GCTCTCAATG AGCTGGTGCT GTTGCAGAAG AGGATCGGCG CCTACCGGAT CGAACCCAAT
CAGTACCGGC CACTGAAAAC CGACAGTCAG CTCCACGCTT TCGAAGCAGG AGAAATGCGA
TGA
 
Protein sequence
MNIILLTGRQ SEALPDEGEY PHYLCEYNGK PLIHTLIDNC AVLQPRRMIC TFSNNDIARL 
HLRNMVPQMH PSASVLAVHN ITRGAACTAL LASEDIDNDD ELLILSVSDF LDIELQDVVR
TFRQSHEDAG VVIFNSLHPR YSFARLDSDC RVIEAAEKNP ISSNAIAGVY WFKSGSLFVS
AAKEMIRKDA RVNDNFYIAP ALNELVLLQK RIGAYRIEPN QYRPLKTDSQ LHAFEAGEMR