Gene Psyr_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0612 
Symbol 
ID3366090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp702078 
End bp702839 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content57% 
IMG OID637650954 
Productnucleotidyl transferase 
Protein accessionYP_233720 
Protein GI66043879 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.639702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAAA TTATCGTTCC GATGGCCGGG GCCGGGAGTC GCTTTGCGGT TGCGGGCTAC 
ACCGATCCCA AACCGTTGAT CCCTGTACAT GGTGTACCGA TGATCAAGGT CGTGATCGAC
AACCTGACGC CGGAGTGCCC GCACAGATTC ATCTTTATCT GTCAGGCGGA ACAGGTCGCC
CGTTACGGGC TGAGGGAAAA ACTGAATGCC TGGGCGCCCG GCTGCGAGAT CGTCGAACTC
GGCGGCCTGA CCGGGGGCGC TGCGTGCTCG GTGTATGCAG CAAGACACCT GCTCGACGAC
AGCCAGCAAG TGATGATCGC CAACAGCGAC CAGTACGTCG ATGTGGATAT AAACGCCTAT
CTGCAGGCAA TGAACGAGAG CGATGCAGAG GGTTTGATCA TGACCATGAA AGCCAACGAT
CCGAAATGGT CTTTCGTGGG TTTCAGTGCA GCAGGTCTGA TCGACCGTGT GGTGGAGAAG
GAGGTTATTT CTGACGAGGC CACCGTCGGC ATCTATAACT TTCGCCGCGC AGATCAACTG
ATATCGGCCA TCGAGGCGAT GATCGCGAAA GATCTTCGCG TCAATGGCGA ATTCTATGTC
GCACCGGTTT ACAACGAGCT CATCGGGCAG GGCGCCAGGG TCATTCATTA CAGCATTGGC
GCAGAAGGTC ATGGCATGTA TGGCCTGGGC ATCCCGGCAG ACCTCAACCA GTTTCTGTCG
CTGCCGCTGA GCAGGCAGGC AGCTTCGGGA AAAGAGGCCT GA
 
Protein sequence
MLQIIVPMAG AGSRFAVAGY TDPKPLIPVH GVPMIKVVID NLTPECPHRF IFICQAEQVA 
RYGLREKLNA WAPGCEIVEL GGLTGGAACS VYAARHLLDD SQQVMIANSD QYVDVDINAY
LQAMNESDAE GLIMTMKAND PKWSFVGFSA AGLIDRVVEK EVISDEATVG IYNFRRADQL
ISAIEAMIAK DLRVNGEFYV APVYNELIGQ GARVIHYSIG AEGHGMYGLG IPADLNQFLS
LPLSRQAASG KEA