Gene Psyr_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0561 
Symbol 
ID3366037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp637990 
End bp638841 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content58% 
IMG OID637650901 
Productflagellar motor protein MotA 
Protein accessionYP_233669 
Protein GI66043828 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA TCATCGGCAT CATTGTCGTT CTCGCAAGTG TCATCGGCGG ATATGTGCTG 
TCCCATGGCA AGGTCATGGC GCTGTTCCAA CCGTACGAGG TCTTGATTAT CGGCGGTGCT
GCACTGGGCG CGTTCCTCCA GGCCAACCCA GGCTACATGT TCATGCACGT GTTCAAGAAG
TCGCTGAAGA TGTTCGGTAC GCGCTTCACA CATGCCTATT ACCTTGAAGT GCTGGGGCTG
GTCTACGAAA TCCTCAACAA GAGCCGCCGT GAAGGCATGA TGGCGATCGA AGGGGATATC
GAAGACGCTG CCTCCAGCCC GATCTTCGCC AAATACCCGG GTGTCCTCAA GGATGAGCGC
ATGACTGCGT ACATCTGCGA TTACCTGCGC ATCATGTCGT CCGGCAACAT GGCTCCTCAC
GAGCTGGAAG GTCTGTTCGA CATGGAGCTG CTGAGCATGA AAGAAGACCT CGAGCATCCA
TCCCACGCCA TTACCGGTAT CGCCGACGGT ATGCCCGGCT TCGGTATCGT GGCTGCGGTA
CTGGGTATCG TGGTGACCAT GGCGTCGCTG GGTTCGGGCG ACAAGGCAGC GATCGGCATG
CACGTAGGTG CGGCGCTGGT CGGTACGTTC TTCGGTATTC TCGCGGCTTA CGGTTTCTTC
GGTCCTCTGG CCACCAGCCT TGCGCATGAT GCCAAGGAAG AAATGAACGT CTACGAGAGC
ATCAAGGCGT CGCTGGTGGC CTCGGCCTCC GGCATGCCGC CTTCGCTGGC TGTCGAATTC
GGCCGCAAGG TTCTCTATCC GCTGCATCGC CCCAGCTTCA GCGAGCTGGA ACAAGCGGTT
CGCGGTCGCT AA
 
Protein sequence
MAKIIGIIVV LASVIGGYVL SHGKVMALFQ PYEVLIIGGA ALGAFLQANP GYMFMHVFKK 
SLKMFGTRFT HAYYLEVLGL VYEILNKSRR EGMMAIEGDI EDAASSPIFA KYPGVLKDER
MTAYICDYLR IMSSGNMAPH ELEGLFDMEL LSMKEDLEHP SHAITGIADG MPGFGIVAAV
LGIVVTMASL GSGDKAAIGM HVGAALVGTF FGILAAYGFF GPLATSLAHD AKEEMNVYES
IKASLVASAS GMPPSLAVEF GRKVLYPLHR PSFSELEQAV RGR