| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0560 |
|---|
| Symbol | |
|---|
| ID | 3366036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 636247 |
|---|
| End bp | 637782 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637650900 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_233668 |
|---|
| Protein GI | 66043827 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACAG TACACGCAGC ACATCACCTC GTTCCGAAGA CGCTGGATGC CTGGGTCAAA
CTGCTTGACG GCATAGCGTT GCCGGTCCCT GCCGTCAATC ATGGACACGT CCGCGCCGCA
CTGAACGACA GTCGTCGGTC GCTGCGTGAA ATTGCCGAAA TGATGCAGGA AAGTCCTGCG
CTGGTGCTGA GCGTGATGCG CGAGGCCAAC CATCACACCC ACGGTTTGAC CGAGCAGGCC
GAGAGCCTTG AAATTGCCAT CAACCGCCTG GGTCTGGCGC GTACCGAAGT CCTGCTGGGC
CGTTTACCGG CCAAGCCGTC CGAAGAAATT CCTGCGGCCT ATCGCCAACT GATTCTGGTC
AGCCAGCACG CCACGCAACA AGCCAACGGC CTGTTCGCCA GCCGGCTGGC GCGACTCTGG
CAGGACATCC ACATGGGCAG CCTGCTGTTT CTGTCGCCGC TCTGGCCGAT GGCGCTGGCT
TATCCGAAGC TGCTCGAAGA GCTGGAACTG CGGGTTATCC ACAAGGGCCA TTCCAGCGCT
GCAGTGGAAA AAGAGCTGTT CGGCGTCAAC CTGCTGGAAC TGTGCCTGGC ACTCGCCGAG
TTCTGGCGCC TGCCGATCTG GGTTACGCGC GGCTATAAAC TGTTGATCAA CGAGCGACGC
GATCTGGCCA AGGCGCTGCG TATCGCCCGC GAAGACAACA GCCCGCTGCA GCAGCAACAA
CTCATGGACG ACGACCCCAA CCTGCGCCGC TGGCTGAACC AGCCCGCCAA TACCGTGTTG
CTGGGCAACG GCCTGGCGCT GGCGGCACAA CAGGCCTGGA ACAGCCCGCA TTGCCTGCGC
TGGGAACGGC TGACCAGCCT GTACCTGCAA CAGCCGATCA GCGAAGTACA GCAACAGGCG
CACCAGAATG CGGCCAGCAG CGCACGCGTC TATGCGGAAA AAGACCTCTG GCACCCGGCC
GAATCGCTGA TCTGGCCGTG GGATGCACGG CGTGTAAGGC GCGACAATGA GCCTGCACCT
CCGCCATCGG CTGACGCCCT GCAAATGTGG CGCAAGCAAT GCGCCGAACT GCTGCAGGAC
CCCAGCCCGT TCATCAACGC CATGCACCTG ACCACCTCGG CGCGCGACGC CTTCATCTCG
TGCGGCATGG AGCGGGTCAT GCTGCTGATG CTGGACAAGA CCTCAACGGT GCTGCGCGTC
AATCAGACTG CCGGACTGCC GAAGGACGCC GCTGCCTTGC AGCTGTTCAT CAAGGAAAGC
ACCGTACTGC AGCGCTTGCT GACCCAGCCG ACGCAGTTAC GCATGACGCC CGCCAACAGT
GCGCAATTTG CCGCCCTGCT GCCCCCGCCG CTGAAAACCC TGTTCAGTGG CCAGCACTGG
CTGATTCGCT CGCTGAGCAA CAACGGCAAA GTCATGCTGC TGGTGGTCGC CGACCAGGGC
GGCGGGGCCT TGTCGGAAAT TTCCGTCCAG GCATTCGGAA AAACCGCGCA ATGTATTGAA
CGGGCACTGG GCATCTTTAG TCATCGCAAA GCCTGA
|
|---|
| Protein sequence | MPTVHAAHHL VPKTLDAWVK LLDGIALPVP AVNHGHVRAA LNDSRRSLRE IAEMMQESPA
LVLSVMREAN HHTHGLTEQA ESLEIAINRL GLARTEVLLG RLPAKPSEEI PAAYRQLILV
SQHATQQANG LFASRLARLW QDIHMGSLLF LSPLWPMALA YPKLLEELEL RVIHKGHSSA
AVEKELFGVN LLELCLALAE FWRLPIWVTR GYKLLINERR DLAKALRIAR EDNSPLQQQQ
LMDDDPNLRR WLNQPANTVL LGNGLALAAQ QAWNSPHCLR WERLTSLYLQ QPISEVQQQA
HQNAASSARV YAEKDLWHPA ESLIWPWDAR RVRRDNEPAP PPSADALQMW RKQCAELLQD
PSPFINAMHL TTSARDAFIS CGMERVMLLM LDKTSTVLRV NQTAGLPKDA AALQLFIKES
TVLQRLLTQP TQLRMTPANS AQFAALLPPP LKTLFSGQHW LIRSLSNNGK VMLLVVADQG
GGALSEISVQ AFGKTAQCIE RALGIFSHRK A
|
|---|
| |