Gene Psyr_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0530 
Symbol 
ID3366006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp598849 
End bp599745 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content62% 
IMG OID637650870 
ProductMig-14 
Protein accessionYP_233638 
Protein GI66043797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0825509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATC GATTCAAGGG CTGGCGCGAG CGTGGCTGGG TGCAGATCGA TGCGGCTGCC 
TACGAGCAGG CCTGGCAGCG GTTTGGCGGC AGCGTCGCCA CTCATCCGCT GGTGGTCGCG
CGCCTGTCGG CCTTTTCCGG CATCGCTGTG CGTTATCTGG CCTGGGAGCA GGGCGGTGAA
GTGAAGGCCG CGATTGCCAC CTGGGGCCGC TCGCTGGCGC TGTCCAAGGA CGAACTCAAG
CGCCACGGCA AGAAAGGGTT GTTCGACCTG GGGAATGCCG AGCTGATTCT GCCGGTGGCC
GATGATACCC AGGTGCCGGT CCGGCATCGG GCCCGCTATG TGTCTGCGCT CAACGAAGGC
CGCATCAGTA CCTTCAAGCC ACAGACCGAA TCCCTGGCGA TGGCGCGTAC GCCTGAAGAA
CTGTCCAAGA AATTTCGTTA CAACCAGCGT CGTGAGCTTC GCTTGCTGGA AGAGGCTGGC
GGGACGGTAA GGCCTGTCAG CGAGTTCAGC AGCGCCGAAC TGGCGAGCAT GTACTGCGAC
CTGTTTCAGC GGCGCTGGGG CTTCGAAGCA ACCGGCGCCC GGCACAAAGC CGAGGTCATC
GAACTGTTGC GCGAGCTGCT GATCGGTTCG GTGGTGTTTC TCAACGATGC GCCGATTGCC
ATTCAACTGG TGTATCGCGT CGAAGCGCCG CAGTGGGTCA GCATCGAGTA CGTCAACGGC
GGTGTCGATC CCCAAACCCG TGATTTCAGT CCGGGCAGCG TGCTCAGCTT CGTCAATACC
CAGTCCGCCT GGGAGAACGC CCGCGCACTG GGCAAATCGC TGCGTTTTTC CTTCGGTCGT
GCCGACCGCG AGTACAAGGA CCGATGGTGC AACCCCGTTC CGGTGTTCCA GATTTGA
 
Protein sequence
MLNRFKGWRE RGWVQIDAAA YEQAWQRFGG SVATHPLVVA RLSAFSGIAV RYLAWEQGGE 
VKAAIATWGR SLALSKDELK RHGKKGLFDL GNAELILPVA DDTQVPVRHR ARYVSALNEG
RISTFKPQTE SLAMARTPEE LSKKFRYNQR RELRLLEEAG GTVRPVSEFS SAELASMYCD
LFQRRWGFEA TGARHKAEVI ELLRELLIGS VVFLNDAPIA IQLVYRVEAP QWVSIEYVNG
GVDPQTRDFS PGSVLSFVNT QSAWENARAL GKSLRFSFGR ADREYKDRWC NPVPVFQI