Gene Psyr_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0480 
Symbol 
ID3365956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp518520 
End bp518924 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID637650820 
ProductTM2 
Protein accessionYP_233588 
Protein GI66043747 
COG category[S] Function unknown 
COG ID[COG2314] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.748725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT ATCGTTCAGA CACACACAGC AAGGTCATGG GCTACCTGAT GTGGATTTTC 
GGGTTCCTGG GAGCGCATCG CTTCTACTAC GGCAAACCGG TCACCGGGAC CCTCTGGTTC
TTCACGTTCG GTCTGTTTGG CATCGGCTGG CTGATCGACC TGTTCCTGAT CCCGTCGATG
GACCGTGACG CCGACCTGCG CTTCACACCC GGCTCCACCG ACTACAGCGT GGCGTGGGTG
CTGCTGACCT TCCTCGGCCT GTTCGGCGTG CACCGCATGT ACCAGGGCAA GTGGATTACC
GGGATCATCT ACCTGTTTAC CGGCGGGTTG TTTCTGGTCG GCATCCTTTA TGACTTCTGG
ACATTGAATG ACCAGATCTC GATGAAGAAC GCCCGACGCG GGTGA
 
Protein sequence
MNAYRSDTHS KVMGYLMWIF GFLGAHRFYY GKPVTGTLWF FTFGLFGIGW LIDLFLIPSM 
DRDADLRFTP GSTDYSVAWV LLTFLGLFGV HRMYQGKWIT GIIYLFTGGL FLVGILYDFW
TLNDQISMKN ARRG