Gene Psyr_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0438 
Symbol 
ID3365914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp475522 
End bp476334 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID637650778 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_233546 
Protein GI66043705 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGG CAACGCAGTC ACTGAAAAAA GGTCGGGACG CCTATTACTG GCGTCTGTTG 
GCAACAGGCA TCAGCTTTGC CCTGTTCGGG TTGAGCGGTT TGTGTCTGCG GTTGTTCGTT
TTTCCAGTAT TGGGTTGCCT GCCTGGCAAT GTGGCCAGCC ATCAACGCCG CGCGCGGCGG
ACCATCAGCC GCCTGTTCTG GCTGTTCATC CGCATCATGG CGCGCATGCG GGTGCTGACC
TATGACGTGC AAGGCGCCGA AAAGCTTGGC CGCCCCGGAC AGATGATCAT CGCCAACCAC
CCGTCACTGA TCGATGTGGT GTTCCTGATC GGGCTGGTGC GGGACGCCAA CTGCGTCGTC
AAACGCAGTC TGTGGGAGAA CCCGTTCACC CGCGGCCCTG TGCGCGCCAC CGGTTACATC
AGCAACGATG GCAGCATGGA CATGCTCGAC GCCGCCGTAG AGCGCCTGCA AAGCGGCCAG
ACACTGATCA TCTTCCCGGA AGGCACGCGC ACCCAGCCAG GTCAGCCGCC GGTCTTTCAC
CGCGGGGCGG CCGCCATTGC GCTGCGTGGC GCGAGCGTCA TCACCCCGGT GACGATCAAG
GTCCAGCCGA CCACCCTGAC CAAGGCCGAG CCCTGGTATC GCATTCCGCA ACGCCGCGTG
CACTTCACTT TGCGCGTCGG TGCCGATATA GACCCAACCG CCTTCAGTGC GCTAGGCCCA
CCGCCCCTGG CGTCCCGCAA GCTCAACGAT TACCTGCATG ACTATTTCAC CAAGGAGCTC
GCCTCAGATG AGCGATCTGC ACCAGGACAT TAA
 
Protein sequence
MELATQSLKK GRDAYYWRLL ATGISFALFG LSGLCLRLFV FPVLGCLPGN VASHQRRARR 
TISRLFWLFI RIMARMRVLT YDVQGAEKLG RPGQMIIANH PSLIDVVFLI GLVRDANCVV
KRSLWENPFT RGPVRATGYI SNDGSMDMLD AAVERLQSGQ TLIIFPEGTR TQPGQPPVFH
RGAAAIALRG ASVITPVTIK VQPTTLTKAE PWYRIPQRRV HFTLRVGADI DPTAFSALGP
PPLASRKLND YLHDYFTKEL ASDERSAPGH