| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0422 |
|---|
| Symbol | |
|---|
| ID | 3365898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 461547 |
|---|
| End bp | 462773 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637650762 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_233530 |
|---|
| Protein GI | 66043689 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTG TGGTAGTGAC CGGCATGTCC GGCATCACCT CGGTAGGCAG CGACTGGCCG
ACTATCGATG CACGCTTTAC GGCCAATCGC AGCGGCATTC GCCGGATGGA CGAGTGGAAC
CGCTTTGCCG AGCTCAATAC TCGCCTGGCT GGTCCCATCG ACGATTTCGC CGTGCCGGGG
CACTGGACGC GCAAGCAACT GCGCAGCATG GGCCGCGTGT CACGCCTGGC CGTGGCGGCT
GCCGAGCAGG CCCTGATCGA CGCCGGGCTG CTGAATGACC CGATCATTCG CGATGGGCGC
ATGGGCACGG CCTGCGGTTC GTCCACCGGC AGCACCGACG AGATCAAGGC CTTCGGCAAC
ATGCTGATCA ACTCGGTGGC CGTGGGCCTG AACGCCAATT CCTATGTGCG GATGATGCCG
CACACCACCG CCGCCAACAT CAGTATCTTC TTCGGCCTGA CCGGACGCCT GATTCCGACC
TCCAGCGCCT GTACCAGCGG CAGTCAGGGC ATCGGCTATG CCTATGAGGC AATCAAGTTC
GGCCGTCTGC CGCTGATGCT GGCGGGCGGG GCCGAAGAGC TGTGCCCGAC CGAGGCCATG
GTCTTCGACG CGCTGTACGC CACCAGCCTC AAGAATGACG CGCCACACAC CACACCACGC
CCCTACGACA GCGGACGCGA CGGCCTGGTG ATCGGTGAAG GCGGCGGCAT GCTGGTGCTT
GAAGAGCTTG AGCATGCCCA GGCACGGGGG GCGCACATCT ACGCCGAAAT AGTCGGCTTC
GGCAGCAACG CCGACGGCGC GCACAGCACT CGCCCCGAGC AGACCACCAT GCGCCGCGCG
ATGGAGCTGG CCCTCGAAGA CGCCAACCTG TCGCCCGACG CCATCGGTTA CGTCAACGGT
CACGGCACCG CCACCGAACA AGGCGACATC GCCGAGACCC TGGCCACCAG CAGCCTGTTC
GGCCCGCGCA TGCCACTTAG CTCGCAAAAA AGCTTTCTCG GTCACACGCT GGGAGCGTGC
GGCGCGCTGG AATCATGGTT CAGCATCGAA ATGCTCAACA GCGATCGCTA TATCCATACC
CTGAACCTGG TCGACATCGA CCCACAGTGC GGCGAACTGG ACTACATCGT CGGCGAACCA
AGGCACATGA GCAACGAATA CGTGATGAAC AACAACTTCG CATTTGGCGG CGTGAACACC
TCGCTGATCT TCAGGCGTTG GGGCTAA
|
|---|
| Protein sequence | MKRVVVTGMS GITSVGSDWP TIDARFTANR SGIRRMDEWN RFAELNTRLA GPIDDFAVPG
HWTRKQLRSM GRVSRLAVAA AEQALIDAGL LNDPIIRDGR MGTACGSSTG STDEIKAFGN
MLINSVAVGL NANSYVRMMP HTTAANISIF FGLTGRLIPT SSACTSGSQG IGYAYEAIKF
GRLPLMLAGG AEELCPTEAM VFDALYATSL KNDAPHTTPR PYDSGRDGLV IGEGGGMLVL
EELEHAQARG AHIYAEIVGF GSNADGAHST RPEQTTMRRA MELALEDANL SPDAIGYVNG
HGTATEQGDI AETLATSSLF GPRMPLSSQK SFLGHTLGAC GALESWFSIE MLNSDRYIHT
LNLVDIDPQC GELDYIVGEP RHMSNEYVMN NNFAFGGVNT SLIFRRWG
|
|---|
| |