Gene Psyr_0356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0356 
Symbol 
ID3365832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp381987 
End bp382730 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content60% 
IMG OID637650698 
Productputative amino-acid ABC transporter ATP-binding protein YecC 
Protein accessionYP_233466 
Protein GI66043625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTGG TTGAAAAACT CACCAAGGCA TTCAAGGGCA ATCAGGTGCT CAAGGGCATC 
GATCTGCGTA TCGAAGCCGG GGAAGTCGTG GCCATCATCG GGCCCAGCGG CTCGGGCAAG
ACCACCCTGC TACGCTGCCT GAATCTGCTT GAAACGCCTG ACAGCGGGAG GATCAAGGTC
GGTGACATCG AGATCAATGG CACCCGTTCC ATGAACCAGC AACAGGGTTT GATCCGCCAG
TTGCGTCAGC AGGTCGGGTT CGTCTTTCAG AACTTCAATC TGTTTCCGCA TCGCACCGCT
CTGGAAAATG TCATCGAAGG CCCGGTGGTG GTCAAGAAGG TGGCCCGTGA AGCCGCCGAG
GCGCTGGGCA GAAAGCTGCT CGCCAAGGTC GGCCTGAGCG GCAAGGAAGA CGCTTACCCG
CGACGCCTGT CCGGCGGGCA GCAACAGCGT GTGGCGATTG CACGGGCGCT GGCGATGGAG
CCGCAAGTGA TCCTGTTCGA CGAGCCGACC TCGGCCCTGG ACCCGGAGCT GGTCGGTGAG
GTGCTGACGA CCATCCGCGC TCTGGCTGAA GAGAAGCGCA CCATGGTCAT CGTCACTCAC
GAGATGAGCT TTGCGCGGGA GGTTGCCAAC CGGGTGATCT TCATCGACAA GGGAGTGATC
GTGGAGCAAG GCGAAGCCAA AGCGCTGTTC GCCAACCCGA AAGAAGAACG CACAAGGCAG
TTTCTCGAGC GTACCCGCTC CTGA
 
Protein sequence
MIVVEKLTKA FKGNQVLKGI DLRIEAGEVV AIIGPSGSGK TTLLRCLNLL ETPDSGRIKV 
GDIEINGTRS MNQQQGLIRQ LRQQVGFVFQ NFNLFPHRTA LENVIEGPVV VKKVAREAAE
ALGRKLLAKV GLSGKEDAYP RRLSGGQQQR VAIARALAME PQVILFDEPT SALDPELVGE
VLTTIRALAE EKRTMVIVTH EMSFAREVAN RVIFIDKGVI VEQGEAKALF ANPKEERTRQ
FLERTRS