Gene Psyr_0115 details

Gene Information

• Locus tag: Psyr_0115
• ID: 3365591
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 125598
• End bp: 126362
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637650459
• Product: hypothetical protein
• Protein accession: YP_233227
• Protein GI: 66043386

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.973044
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGGCCT TCTACCTCAA GTTACTCATC ACCCCCGCGC TCATGCTGGC TATTTCATTG 
GCGGCCAGGC GTTGGGGTAC CGGCGTTGCA GGGCTGCTTT CCGGGCTGCC GATGACCTCG 
GCGTTGGTCA TGCTGTTTCT CAGCCTCGAG CAAGGCACCC AATTCGCCTC GATGGCGGTG 
CCTGGGGCAT TGGCCGGGCT GGCGGCGATT CAGGCGACTT ACCTGTTTTA TTTCCTGATC 
ACTCGGCACG TTTCGGCGCT GACGGGATGC GTCCTGGCTC TGGCGGTGTA TGGCGCGACG 
GCCTTTCTGA TGAACCTGTC GGGCTTACTG GCGCTGTCGA TCATTTTTAC GCTGCTGATG 
GTTGCGCTGA TCATCGTTGC CACCTCGAAA CAGACACCGC CGGACGTAGC GTCATACGTG 
GCACTGCCAC GCTGGGTCAT TCCGATGCGC ATGCTGACGG CCACCCTTCT GCTGCTGGCG 
ATTACCGCAA GCGCTACCTG GCTCGGGCCG GTGGTCAGTG GACTGCTGGC GCCCATCCCG 
GTGATCGCCT GGCCGCTTGC AGTGTTCGTC CATGTGCAAG GCGGGCGTTA TGAACTGGCG 
GCGATAATCT GCGGCAATGC CATTGGCGCC GTCGGAGTGG TGAGTTTCTA CCTGACCCTC 
CGGTACTCCA TATTGCAATG GGGCGCGCTT CTGTCTATCG CGGCTGCCGT TTTGCTGGCT 
GTCGTGGTGA CGGCTGGGTT GGCGCGGTTG TTGGCGAGGC GGTAG 

 

Protein sequence

MTAFYLKLLI TPALMLAISL AARRWGTGVA GLLSGLPMTS ALVMLFLSLE QGTQFASMAV 
PGALAGLAAI QATYLFYFLI TRHVSALTGC VLALAVYGAT AFLMNLSGLL ALSIIFTLLM 
VALIIVATSK QTPPDVASYV ALPRWVIPMR MLTATLLLLA ITASATWLGP VVSGLLAPIP 
VIAWPLAVFV HVQGGRYELA AIICGNAIGA VGVVSFYLTL RYSILQWGAL LSIAAAVLLA 
VVVTAGLARL LARR