| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0017 |
|---|
| Symbol | |
|---|
| ID | 3365492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 20699 |
|---|
| End bp | 22045 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637650360 |
|---|
| Product | Fmu, rRNA SAM-dependent methyltransferase |
|---|
| Protein accession | YP_233129 |
|---|
| Protein GI | 66043288 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC GTCTGGCCGC CGCCAAGGCA CTGGCTGCCG TACTCAGCGG CAAGGCCTCG
CTGAACAGCT CGTTGCCGAC TCAACTGGAC AAGGTCGAGG TGCGTGATCG TGGCCTGACG
CAGGACCTGG CATTCGGCAC CGCGCGCTGG CAGCCGCGTC TGTCGGCATT GGCGGCCAAG
CTGCTGCAGA AGCCCTTCAA GGCCGCCGAC GCCGACGTTG AAGCCTTGTT GCTGGTCGGC
CTTTATCAAC TGTTCTACAG CCGCATTCCG GCCCATGCTG CCATTGGCGA AACCGTGGGC
TGCGCCGACA AATTGAAAAA GCCGTGGGCC AAAGGCTTGC TCAACGCCGT GCTGCGCAAT
GCGCAACGTG ACGGCGAGGC GCTGCTGATC GAGCTGGAAC ACGACCCGGT GGTGCGTACC
GCCCACCCGC GCTGGCTGCA GAAAGCTTTG AAAGCCGCCT GGCCGGAACA GTGGGAAGCC
ATCTGCGCGG CCAACAATGC GCACCCGCCA ATGATCTTGC GCGTCAACCG ACGCCATCAC
CGTCGCGATC AATACCTCGA ACTGCTCGAC ACTGCCGGCC TGCAAGCCAG TGCGTGCACG
TTCAGTCAGG ACGGCATCGT GCTCGCCGAG CCGTGCGATG TGCGCTCGCT GCCCGGTTTT
GCCGAAGGCT GGATCAGCGT GCAGGATGAA GCCGCGCAGC TGGCCGCCGA CCTGCTGGAA
CTGGCCCCCG GGCAACGGGT ACTCGATGCC TGCTGCGCGC CGGGCGGCAA GACCTGCCAT
TTGCTCGAAG TACAGCCGCA ACTGGACGGC GTGGTGGCGG TGGATCTGGA AGCCAAGCGT
CTGGTGCGCG TGCGTGAAAA CCTCGATCGC CTGGGGCTGG ATGCCGAGCT GATTGCCGCC
GACGCCCGCG AGACCGCGCA GTGGTGGGAC GGCAAACCGT TCCAGCGCAT CCTGCTCGAC
GCACCGTGCT CGGCGACCGG CGTGATTCGT CGGCATCCGG ACATCAAACT GACTCGTCAG
GCAGACGACA TCGCCGCGCT GGCGGCCTTG CAGGGCGAGC TGCTCGATGC GTTGTGGCCT
ACGCTGCAGG TAGGCGGCAT GCTGGTGTAC GCGACCTGCT CGACACTGCC AACCGAAAAC
ACCGACGTCA TCGAGGCGTT TCTGGCGCGT ACCTCCGGGG CCAGAGAGCT GGATATCGCC
GGGCAGGCCG GACAGCCGCC CGCGGGTATC AAGCAAGCCC ATGGTCGCCA GCTGCTGGCC
CAGCAAGGCG GCCACGACGG TTTCTACTAC GCCAAACTGA TCAAGATCGC GGATCAAGAT
CGCGGCGGCG CGGGAGTAAG CGCGTGA
|
|---|
| Protein sequence | MNPRLAAAKA LAAVLSGKAS LNSSLPTQLD KVEVRDRGLT QDLAFGTARW QPRLSALAAK
LLQKPFKAAD ADVEALLLVG LYQLFYSRIP AHAAIGETVG CADKLKKPWA KGLLNAVLRN
AQRDGEALLI ELEHDPVVRT AHPRWLQKAL KAAWPEQWEA ICAANNAHPP MILRVNRRHH
RRDQYLELLD TAGLQASACT FSQDGIVLAE PCDVRSLPGF AEGWISVQDE AAQLAADLLE
LAPGQRVLDA CCAPGGKTCH LLEVQPQLDG VVAVDLEAKR LVRVRENLDR LGLDAELIAA
DARETAQWWD GKPFQRILLD APCSATGVIR RHPDIKLTRQ ADDIAALAAL QGELLDALWP
TLQVGGMLVY ATCSTLPTEN TDVIEAFLAR TSGARELDIA GQAGQPPAGI KQAHGRQLLA
QQGGHDGFYY AKLIKIADQD RGGAGVSA
|
|---|
| |