Gene Psyc_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_2114 
Symbol 
ID3516101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2611841 
End bp2612530 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID637670829 
ProductABC efflux transporter, ATPase subunit 
Protein accessionYP_265395 
Protein GI71066668 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAG CATTACCTAC CTCAAAAGCA GTGCTGCTCA CTGCCACTAA GTTAAATAAG 
ACCGTACACG TTGGCGACCA GTCCTTATCT ATTATTAAAG ACGTCGATAT TCATGTCAAT
GCTGGCGAGT TTGTGGTGAT CATGGGTAAA TCTGGTTCTG GAAAATCCAC TTTGCTGGGT
TTATTAGCGG CGTTAGATTA TCCGGATAGC GGCGACGTTG AGCTCGCAGG TCAAACCTTA
AGCCGATTAA ATGAAGATGC TTTAGCGGTT ATTCGGCAGC GCGATATGGG TTTTGTGTTT
CAGTCCTTTC ATCTGCTACC AACGCTAACC GTTGCTGAAA ATATCGCTTT TCCGTTGGAT
ATCGCCCGTC GCCCAGATGC GGCGCGCGTT GATGAATTGA TTGAGGCAGT TGATTTGGGT
CATAGGCGTC ATAGCTTGCC AAACCAGTTA TCAGGTGGCG AGCAACAGCG TACGGCGGTT
GCTCGCGCAT TGGTATCACG CCCAAAGATT GTCTTTGCTG ATGAGCCTAC CGGTAATTTA
GATGAACAAA ACGCCAATCA AGTCATGCAG CTATTACTGG ATTTGCGTCA GAAAACCGGC
TCGGCGCTGG TGGTGGTCAC CCATGATTCA GCACTTGCTG ATATGGCAGA TCGCGTTATT
ACCATGCATG ACGGACGGAT TGTATCGTAA
 
Protein sequence
MTSALPTSKA VLLTATKLNK TVHVGDQSLS IIKDVDIHVN AGEFVVIMGK SGSGKSTLLG 
LLAALDYPDS GDVELAGQTL SRLNEDALAV IRQRDMGFVF QSFHLLPTLT VAENIAFPLD
IARRPDAARV DELIEAVDLG HRRHSLPNQL SGGEQQRTAV ARALVSRPKI VFADEPTGNL
DEQNANQVMQ LLLDLRQKTG SALVVVTHDS ALADMADRVI TMHDGRIVS