Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2114 |
Symbol | |
ID | 3516101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 2611841 |
End bp | 2612530 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637670829 |
Product | ABC efflux transporter, ATPase subunit |
Protein accession | YP_265395 |
Protein GI | 71066668 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCAG CATTACCTAC CTCAAAAGCA GTGCTGCTCA CTGCCACTAA GTTAAATAAG ACCGTACACG TTGGCGACCA GTCCTTATCT ATTATTAAAG ACGTCGATAT TCATGTCAAT GCTGGCGAGT TTGTGGTGAT CATGGGTAAA TCTGGTTCTG GAAAATCCAC TTTGCTGGGT TTATTAGCGG CGTTAGATTA TCCGGATAGC GGCGACGTTG AGCTCGCAGG TCAAACCTTA AGCCGATTAA ATGAAGATGC TTTAGCGGTT ATTCGGCAGC GCGATATGGG TTTTGTGTTT CAGTCCTTTC ATCTGCTACC AACGCTAACC GTTGCTGAAA ATATCGCTTT TCCGTTGGAT ATCGCCCGTC GCCCAGATGC GGCGCGCGTT GATGAATTGA TTGAGGCAGT TGATTTGGGT CATAGGCGTC ATAGCTTGCC AAACCAGTTA TCAGGTGGCG AGCAACAGCG TACGGCGGTT GCTCGCGCAT TGGTATCACG CCCAAAGATT GTCTTTGCTG ATGAGCCTAC CGGTAATTTA GATGAACAAA ACGCCAATCA AGTCATGCAG CTATTACTGG ATTTGCGTCA GAAAACCGGC TCGGCGCTGG TGGTGGTCAC CCATGATTCA GCACTTGCTG ATATGGCAGA TCGCGTTATT ACCATGCATG ACGGACGGAT TGTATCGTAA
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Protein sequence | MTSALPTSKA VLLTATKLNK TVHVGDQSLS IIKDVDIHVN AGEFVVIMGK SGSGKSTLLG LLAALDYPDS GDVELAGQTL SRLNEDALAV IRQRDMGFVF QSFHLLPTLT VAENIAFPLD IARRPDAARV DELIEAVDLG HRRHSLPNQL SGGEQQRTAV ARALVSRPKI VFADEPTGNL DEQNANQVMQ LLLDLRQKTG SALVVVTHDS ALADMADRVI TMHDGRIVS
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