| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_2024 |
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| Symbol | atpD |
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| ID | 3515998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2492286 |
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| End bp | 2493719 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637670726 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_265305 |
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| Protein GI | 71066578 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.531003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCG GTCGTATTGT ACAGATTATT GGCGCGGTTC TTGACGTTGA GTTCAACCGT
AACGAAGTTC CTCGGATTTA TGATGCCTTA CAAGTAGACG GTACTGAAAC CACCCTAGAA
GTACAGCAAC AGCTAGGTGA TGGCATCGTA CGTACTATTG CTATGGGTTC TACTGAAGGA
CTAAAGCGTA ACCTTTCAGT TACCAATACT GGTGGCCCAA TTTCTGTGCC AGTAGGCGTT
GGTACACTAG GTCGCATCAT GGATGTTCTT GGACGTCCTA TCGATGAAGA AGGTCCAGTA
GAAGCAGATG AGCGTTGGTC AATTCACCGT GAAGCGCCAA GCTATGCAGA ACAATCAAAC
AGCACTGAAC TTTTAGAAAC TGGTATTAAA GTAATCGATT TACTTTGCCC GTTTGCTAAA
GGTGGTAAAG TTGGTCTGTT TGGTGGTGCT GGTGTTGGTA AAACTGTCAA CATGATGGAA
TTGATCAACA ACATCGCGCT TAAACATGAA GGTTTATCAG TATTTGCTGG TGTTGGTGAG
CGTACGCGTG AAGGGAATGA CTTCTATCAC GAAATGCAAG AAGCTGGCGT TGTAAATACT
GAAGACTTTA GTAAATCTAA AGTTGCGATG GTATACGGTC AGATGAATGA GCCACCGGGT
AACCGTTTAC GTGTTGCGCT GTCTGGTTTG ACCATGGCTG AATACTTCCG TGATACCAAA
GATCCTGCTA CTGGCAAAGG TCGTGACGTA TTGCTATTCG TTGATAACAT CTACCGTTAT
ACACTAGCCG GTACTGAAGT ATCAGCACTG CTTGGTCGTA TGCCATCAGC CGTTGGTTAT
CAGCCAACAC TTGCTGAAGA GATGGGTATG CTCCAAGAGC GTATTACTTC TACGCAATCA
GGCTCTATTA CTTCTGTGCA AGCGGTATAT GTACCTGCGG ATGACTTGAC GGATCCATCA
CCAGCAACGA CGTTTGCTCA CTTGGATGCG ACAGTTGTAC TAAGCCGTGA TATCGCTTCA
CAAGGTATCT ATCCTGCGGT TGATCCACTG GATTCAACGT CACGTCAGCT AGATCCATTA
GTTATCGGTG AAGAGCATTA CAACGTTGCT CGTGGTGTTC AGGAAGTTCT ACAGCGCTAT
AAAGAACTGA AAGACATCAT CGCGATTTTG GGTATGGATG AGTTATCAGA AGAAGATAAA
CTAGTCGTTT ATCGTGCTCG TAAAATCCAG CGCTTCTTAT CACAGCCATT CCACGTTGCT
GAAGTCTTTA CCGGTGCACC TGGTAAATAT GTTCCACTAC GCGATACCAT TGCAAGCTTT
AAAGCAATCA TCGCTGGTGA ATATGACAGC TTACCAGAGC AAGCCTTCTA TATGGCTGGC
GGCATTGACG AAGTCGTTGC TAAAGCTGAA AAAATGAAGT CTTCTGCAGC GTAA
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| Protein sequence | MSSGRIVQII GAVLDVEFNR NEVPRIYDAL QVDGTETTLE VQQQLGDGIV RTIAMGSTEG
LKRNLSVTNT GGPISVPVGV GTLGRIMDVL GRPIDEEGPV EADERWSIHR EAPSYAEQSN
STELLETGIK VIDLLCPFAK GGKVGLFGGA GVGKTVNMME LINNIALKHE GLSVFAGVGE
RTREGNDFYH EMQEAGVVNT EDFSKSKVAM VYGQMNEPPG NRLRVALSGL TMAEYFRDTK
DPATGKGRDV LLFVDNIYRY TLAGTEVSAL LGRMPSAVGY QPTLAEEMGM LQERITSTQS
GSITSVQAVY VPADDLTDPS PATTFAHLDA TVVLSRDIAS QGIYPAVDPL DSTSRQLDPL
VIGEEHYNVA RGVQEVLQRY KELKDIIAIL GMDELSEEDK LVVYRARKIQ RFLSQPFHVA
EVFTGAPGKY VPLRDTIASF KAIIAGEYDS LPEQAFYMAG GIDEVVAKAE KMKSSAA
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