Gene Psyc_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1921 
Symbol 
ID3515891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2369784 
End bp2370374 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content47% 
IMG OID637670619 
Productmetallopeptidase peptidase 
Protein accessionYP_265203 
Protein GI71066476 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00318807 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACCAG ATAGCAATCA CGAACAACCA AAGCCTACGT TTATTAGCCG AGCAATTAGC 
GTATTTATCA AGGCTGCGGC ATTGCTGATG CTGTTATTCG TATTTGACAG ATTACTGCCA
AGTATCAGCC AACAAACCCA ATCATTTTTC ATAGCAAAAT GGCAGCAGCT TAGTTTGCTA
CAACAACCAT TACCAGCAGA AAACAGCCTA CTAAGCCCCT TGCCCAAGCA GCCTCTAACA
GATACGTGGG GCGCTGCTCG TAGTCAAGGT CGCTCACATG AAGGGATTGA TATTTTTGCA
GCGCGCGGCA CGCCAATACA AGCTACAACG CAAGGCATTG TTAGCAAAGT AGGCGAAGAT
GCTTTAGGGG GTCGCGTCGT CATGATAGTG GGACCTGGCG GCGCCGGACA CTATTATGCC
CATTTGGAAG ACTATGCTGA CATCTCTCAC AATGACTGGG TAAATGCGGG CGACATCATC
GGTTATGTGG GTGACAGTGG CAACGCTAAA GGTACACCGC CACATGTCCA TTATGGGATT
TATATTAATG GTAGTGCGGT GAACCCTTAT CCGCTTTTAC AAAAGAATTA G
 
Protein sequence
MRPDSNHEQP KPTFISRAIS VFIKAAALLM LLFVFDRLLP SISQQTQSFF IAKWQQLSLL 
QQPLPAENSL LSPLPKQPLT DTWGAARSQG RSHEGIDIFA ARGTPIQATT QGIVSKVGED
ALGGRVVMIV GPGGAGHYYA HLEDYADISH NDWVNAGDII GYVGDSGNAK GTPPHVHYGI
YINGSAVNPY PLLQKN