Gene Psyc_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1913 
SymbolnadR 
ID3515883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2361125 
End bp2362192 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content50% 
IMG OID637670611 
Productbifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 
Protein accessionYP_265195 
Protein GI71066468 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase
[COG1056] Nicotinamide mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.680637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000316043 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTGAAC TATCAGAGCA ACATTCAGAT AAACAACACC CCGACCAGAA AAGCAGTACA 
CACTATCGCT ATTTGGTGTT TATTGGGCGT TTCCAGCCCT TTCATTGTGG TCATAAAGCG
GTCATTGATG AGGCGCTAAA GCGTGCTAAC AATGTCATTA TGCTGATCGG TTCTGCCAAC
CTACCGCGCA GTTTGCGCAA TCCATTTAGT GTTGCTGAAC GCGCTGCGAT GATTAAGGGC
GCGTATTCAG CAGAGGAAGC GGCGCGTATC CACTGCGTCG GACTCGACGA TGCACTCTAC
AACGACACGC GCTGGCTTCA ATATGTACAA GCCGGTGTGA AGTCTGTCAC CGGCGACTTA
CAGACTGATA TCGGTCTGAT TGGTCATTCA AAAGACAGCT CATCGTATTA TCTATCACTA
TTCCCCAACT GGGCATCCGT CTCCGTACCC AATTATCACA ATTTATCCGC TACGCCCATA
CGCGACAGCT ATCTGATGGG TGCCACACCA ACGCCTGAGC GCACCCCTGA ATCCACACGC
AGCGTATTGG ATGAATTCAA ACAAACAAGC GAATACCAAC AGCTGCACGA TGAAGCAGAT
TTTGTTGATA AGTATAAAAG ACAATGGGAA TCCGCCCCTT ATCCACCGAC CTTTATGACC
GCTGATGCCT TGGTCGTACA ATCAGGGCAT ATCTTGCTGG TTGAGCGCCG TAGTATGCCG
GGGCAAGGAT TGTGGGCACT GCCGGGTGGT TTTTTGAACC CAAAAGAGAC CCTATTCGAC
GCCTGTATCC GTGAGCTCCG TGAGGAAACT CGCCTTAAAG TCCCCGAGCC CGTCTTGCGC
GGCTGTTGTC ATAGCCAACA TACCTTTGAC GACCCTTATC GCTCGGCGCG TGGGCGTACG
ATCACCCAAG CATTTTACTT TCAGCTCAAA AATGACCCAA AAGGATTGCC AAAAGTAAAA
GGTGGTGATG ATGCAGCCAC GGCTTTTTGG TTACCACTCG CTGAGCTTGA TGCCACCATG
ATGTTTGAAG ACCACTATGC CATTATTACC AAAATGGTCG GCTTGTAG
 
Protein sequence
MSELSEQHSD KQHPDQKSST HYRYLVFIGR FQPFHCGHKA VIDEALKRAN NVIMLIGSAN 
LPRSLRNPFS VAERAAMIKG AYSAEEAARI HCVGLDDALY NDTRWLQYVQ AGVKSVTGDL
QTDIGLIGHS KDSSSYYLSL FPNWASVSVP NYHNLSATPI RDSYLMGATP TPERTPESTR
SVLDEFKQTS EYQQLHDEAD FVDKYKRQWE SAPYPPTFMT ADALVVQSGH ILLVERRSMP
GQGLWALPGG FLNPKETLFD ACIRELREET RLKVPEPVLR GCCHSQHTFD DPYRSARGRT
ITQAFYFQLK NDPKGLPKVK GGDDAATAFW LPLAELDATM MFEDHYAIIT KMVGL