| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1887 |
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| Symbol | rpoB |
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| ID | 3515856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2329248 |
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| End bp | 2333366 |
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| Gene Length | 4119 bp |
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| Protein Length | 1372 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670584 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_265169 |
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| Protein GI | 71066442 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATT CTTATACTGA AAAAAAGCGT ATTCGCAAAA GTTTTGCTGA ATTGCCTACT
GTGATGGACA TTCCCTATTT GTTGTCTATC CAAGTAGATT CTTATGAGCA ATTTTTGCAA
GAGCATAAAA AGCCAAAAGC TCGTGAGAAT ACTGGCTTGC AAGCTGCATA CTCTTCTATT
TTTCCAATTG AGAGTCACTC TGGTAATGCA GAGCTACAAT TCGTTGAATA CTATTTAGGT
ACGCCTGAAT TTGATGAGCG TGAGTGTATC TTACGTGGTT CGACGTTTGC TGCGCCTATG
CGTGTCAAAA TTCGCTTAAT CATCAAAGAC AAAGATAGCA AAGATAAAGA CAGCAAAGCG
GCTATTAAAG ATATCCGTGA GCAAAGCGTT TATATGGGCG AGATGCCACT TATGACCGCT
AACGGTACCT TTATTATCAA TGGTACTGAG CGTGTTATCG TCTCTCAGCT TCATCGTTCA
CCTGGTGTGT TCTTTGACCA TGATAAAGGT AAGTCGCACT CAAGTGGTAA AGTTCTATAT
AACGCTCGTA TCATTCCTTA CCGTGGTTCA TGGCTTGACT TTGAATTCGA TGCTAAAGAC
TTAGTTTTTG CTCGTATTGA TCGTCGTCGT AAGCTATTGG CATCTATTAT TCTGCGCGCT
TTAGGCTTAA GCACTTCTGA GATCTTAGAT TTATTCTTTG ATAAAGTGAA GGTTTATAAA
GGTGAAGAGC AGTTCGAGAT TGATCTGGTT GCTGATCGCT TACGTGGTGA GATGGCACAG
TTCGATATCG TTACTCCTGA AGGCGACGTA GTTGTTGAGC AGGGAAAACG TATTAATGCT
CGCCGTATCC GTCAGCTTGA AGAAGCGGGT ATGACGAAAA TCTCGATTCC TGATGAATAC
TTATATGAGC GTATTTTAGC AGAAGACATC ATCGTTAATG ATGAAGTTAT CGCTCGTGCT
AACACGCTGA TTGACCATGA ATTATTGGTT AAACTAAGTG CATTTGAAGC CAGTGAATCT
ATTAAAGAAT TCAGTATTCT GTTCACTAAT GATATCGATC AGGGCAGTTA TATTGCTGAT
ACGCTACGTG CAGATAGCAC GTCAAGCCGT GAAGAAGCTT TGATTGAGAT TTATAAAGTC
ATGCGCCCAG GTGAGCCACC AACGGTTGAG ACTGCTGAGA AACTTTTTGA CAGCATGTTC
TTTAACGCGG ATCGTTATGA CTTATCGAAT GTCGGTCGTA TGAAGTTTAA CCGTCGTTTA
GGTCTTGATT TTGTAGATAC GGATGACGCT GATATTCAGC GTGAACGTAG CGTATTGACC
AATGCCGACA TCGTTAACGT ATTAAAAGAG CTGATCGAGA TTCGTAATGG TCGCGGTGAA
GTTGATGATA TTGACCATTT AGGTAACCGC CGTATTCGTT CGGTCGGCGA GATGGCAGAA
AACCAATTCC GTGTCGGTCT AGTACGTGTT GAGCGTGCGG TTAAAGAGCG TTTAAGCTCA
GCAGAATCTG ATAATTTATC GCCACAAGAT TTGATTAATT CAAAACCTGT TGCGGCAGCG
GTTAAAGAAT TCTTTGGCTC AAGCCAGTTA TCACAGTTTA TGGATCAGAA TAATCCATTG
TCTGAAGTGA CGCATAAACG TCGTGTTTCA GCGTTAGGAC CCGGTGGTCT GACCCGTGAA
CGTGCAGGCT TTGAAGTACG TGACGTACAT GATACGCATT ATGGTCGCGT ATGTCCGATT
GAAACTCCTG AAGGTCCAAA CATTGGTTTG ATTAACTCAT TAGCAACTTT TGCTAAAACT
AATAGCTTCG GCTTCTTAGA GACGCCTTAT CGTCGTGTGG TAGATGGTAA AGTCACGGAT
GTTATTGAAT ATCTATCAGC AATTGAAGAA GTAGGTACGG TCATTGCACA GGCTGATTCA
CCAGTGACCG CCGATGGCGC GTTATCTGAT GAGATGGTCA GTGTGCGTAG TTATGGTGAA
TTCGTCCGCA TGCCGCCAGA AAAAGTGACA CATATGGATG TGTCGCCAAG TCAGGTAGTA
TCGGTCGCAG CTGGTTTGAT TCCATTCCTA GAGCATGATG ATGCTAACCG TGCCTTGATG
GGCTCGAACA TGCAGCGTCA GGCGGTTCCT ACGCTACGTG CTGATAAGCC GTTAGTAGGT
ACGGGTATGG AACGTCACGT TGCGCGTGAC TCAGGTGTTT GTGTGATCGC TAAGCGTGGC
GGCGTGATCG AAGATGTTGA TGCGTCGCGT ATTGTCGTTC GTGTTAATGA AGCAGAGATG
ATTGCTGGTG AAGCCGGTAT TGATATCTAT AACTTAGTTA AATACACACG TTCGAACCAA
AACACTTGTA TCAACCAACG TATTATCGTT AACCAAGGCG ATGAAATTGC TTTCGGTGAT
ATCTTGGCTG ATGGTCCATC AACGGATCTT GGTGAGTTAG CATTAGGTCA GAACATCCGC
ATCGCATTTA TGCCGTGGAA TGGTTACAAC TTCGAAGATT CAATCTTGTT ATCTGAAAAA
GTCGTGAAAG AAGATCGTTT CACGACCATT CATATTCAAG AATTGACCTG TGTGGCGCGT
GATACCAAGC TAGGTACTGA AGAGATCACT GCTGATATTC CAAACGTTGG TGAAGCAGCT
CTATCAAGTC TTGATGAAGC CGGTATTGTT TATATTGGTG CTGAAGTTGA CGCTGGTGAT
ATCCTAGTTG GTAAAGTGAC ACCAAAAGGT GAGACGCAAC TAACGCCAGA AGAGAAATTG
CTCCGGGCTA TCTTTGGTGA AAAAGCCGCT GATGTGAAAG ACACGTCGTT ACGTGTTCCA
ACATCAAGCA AAGGTACGGT TATTGACGTA CAAGTCTTTA CCCGTGACGG TGTTGAAAAA
GATGCGCGTG CAAGAGCGAT TGAAAAATCA CAGCTTGATA GCTATCGTAA AGATTTAAAA
GAAGAGCTCC GCATCTTTGA AGAAGCAGCT CGTGGTCGTA TTGGTAATCT TTTAGATGGT
CAAAAAGTCA GTGGTGGTTC TGGTCTAAAA GCCGGTACAA TCATGGCATT GGCTGATATG
AAAGATATGA GCCTTGAGAC TTTGCTTGAT ATCCAGCCAG TTGAAGAAGA AATCTCTGAG
CGTCTAACGC AAATCGCAGA GTACTTAGTT GATAAGCAAA AAGATATCGA TGTGAAGTTT
GCTGAGAAAA AACGCAAACT GACGGCAGGT GATGATTTAC AACATGGCGT ACAAAAAATC
GTTAAGGTCT ATCTAGCGGT TAAGCGTCGT ATCCAGCCTG GTGATAAAAT GGCGGGTCGT
CATGGTAACA AAGGTGTGGT ATCACGTATT ATGCCAGTTG AAGACATGCC GTATGATGAG
CATGGCAATA CTGTCGACAT CGTATTGAAC CCGCTTGGTG TTCCATCACG TATGAACATT
GGTCAGGTTC TTGAGACGCA TTTGGGTATG GCAGCAAAAG GCTTGGGCGA AAAAATTGAT
GGCATGCTCA AATCGCAAGC AGCAATCAAA GATTTGCGTG AGTTCTTAGA TAAAATCTAT
AACCAAGTGG GCGGCGAGCA AGTCGATCTT GATAGCTTAA CTGATGATGA CATCATGGCG
CTAGCAGATA ACTTGCGTGC TGGTGTGCCA ATGGGTACGG CAGTATTCGA TGGTGCAAAA
GAAAGCCAAG TTAAAGATTT GCTAGAGCTT GCTGGTATGG ATCGTGATGG TCAGCAGACG
TTATATGATG GTCGTACGGG TCAGAAGTTT GACCGTAAAG TGACGGTTGG CTACATGTAT
ATGCTGAAAT TGAACCATTT AGTCGATGAC AAAATGCATG CGCGTTCAAC TGGTTCATAC
TCACTAGTGA CGCAGCAGCC TCTAGGTGGT AAAGCTCAGT TTGGTGGTCA GCGCTTTGGT
GAGATGGAAG TATGGGCACT AGAAGCTTAT GGCGCGACTT ATACCTTGCA AGAGATGCTG
ACTGTGAAGT CGGATGACGT TGAAGGCCGT ACGCGTATGT ACAAAAACAT CGTCGATGGT
GAGCAATATA TGGATCCAGG TATGCCTGAA TCGTTTAACG TGTTGACCAA AGAAATCAAA
TCACTGGGTA TTAATATTGA GTTAAAACAA ACCCATTAA
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| Protein sequence | MAYSYTEKKR IRKSFAELPT VMDIPYLLSI QVDSYEQFLQ EHKKPKAREN TGLQAAYSSI
FPIESHSGNA ELQFVEYYLG TPEFDERECI LRGSTFAAPM RVKIRLIIKD KDSKDKDSKA
AIKDIREQSV YMGEMPLMTA NGTFIINGTE RVIVSQLHRS PGVFFDHDKG KSHSSGKVLY
NARIIPYRGS WLDFEFDAKD LVFARIDRRR KLLASIILRA LGLSTSEILD LFFDKVKVYK
GEEQFEIDLV ADRLRGEMAQ FDIVTPEGDV VVEQGKRINA RRIRQLEEAG MTKISIPDEY
LYERILAEDI IVNDEVIARA NTLIDHELLV KLSAFEASES IKEFSILFTN DIDQGSYIAD
TLRADSTSSR EEALIEIYKV MRPGEPPTVE TAEKLFDSMF FNADRYDLSN VGRMKFNRRL
GLDFVDTDDA DIQRERSVLT NADIVNVLKE LIEIRNGRGE VDDIDHLGNR RIRSVGEMAE
NQFRVGLVRV ERAVKERLSS AESDNLSPQD LINSKPVAAA VKEFFGSSQL SQFMDQNNPL
SEVTHKRRVS ALGPGGLTRE RAGFEVRDVH DTHYGRVCPI ETPEGPNIGL INSLATFAKT
NSFGFLETPY RRVVDGKVTD VIEYLSAIEE VGTVIAQADS PVTADGALSD EMVSVRSYGE
FVRMPPEKVT HMDVSPSQVV SVAAGLIPFL EHDDANRALM GSNMQRQAVP TLRADKPLVG
TGMERHVARD SGVCVIAKRG GVIEDVDASR IVVRVNEAEM IAGEAGIDIY NLVKYTRSNQ
NTCINQRIIV NQGDEIAFGD ILADGPSTDL GELALGQNIR IAFMPWNGYN FEDSILLSEK
VVKEDRFTTI HIQELTCVAR DTKLGTEEIT ADIPNVGEAA LSSLDEAGIV YIGAEVDAGD
ILVGKVTPKG ETQLTPEEKL LRAIFGEKAA DVKDTSLRVP TSSKGTVIDV QVFTRDGVEK
DARARAIEKS QLDSYRKDLK EELRIFEEAA RGRIGNLLDG QKVSGGSGLK AGTIMALADM
KDMSLETLLD IQPVEEEISE RLTQIAEYLV DKQKDIDVKF AEKKRKLTAG DDLQHGVQKI
VKVYLAVKRR IQPGDKMAGR HGNKGVVSRI MPVEDMPYDE HGNTVDIVLN PLGVPSRMNI
GQVLETHLGM AAKGLGEKID GMLKSQAAIK DLREFLDKIY NQVGGEQVDL DSLTDDDIMA
LADNLRAGVP MGTAVFDGAK ESQVKDLLEL AGMDRDGQQT LYDGRTGQKF DRKVTVGYMY
MLKLNHLVDD KMHARSTGSY SLVTQQPLGG KAQFGGQRFG EMEVWALEAY GATYTLQEML
TVKSDDVEGR TRMYKNIVDG EQYMDPGMPE SFNVLTKEIK SLGINIELKQ TH
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