Gene Psyc_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1842 
Symbol 
ID3515811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2265219 
End bp2268293 
Gene Length3075 bp 
Protein Length1024 aa 
Translation table11 
GC content46% 
IMG OID637670539 
Productpeptidase M16 familiy 
Protein accessionYP_265124 
Protein GI71066397 
COG category[R] General function prediction only 
COG ID[COG1026] Predicted Zn-dependent peptidases, insulinase-like 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.284572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA CGCCGTTTAC TGCTGATTTA ACCCTGCATC CTGCCTTTGA GCTGCTTGAG 
CACCGCCATA TCGATGCATT ATCGATGGAT GTGTTGATCA GTCAGCACGT AAAAACAGGA
GCGATGCACT ATCATTTGGC GCATCCAAGT GATGAAAATG CGTTTTTGGT CGGCTTTCGT
ACCCAGCCGA TGGATTCAAA GGGTGAAGCG CATATTTTAG AGCACGTAGC ATTATGTGGC
TCGAAGAAAT TCCCCGTTCG TGATCCGTTC TTTTCAATGA TTAAGCGCTC ATTAAATACT
TTTATGAATG CGATGACGGC TGCTGACTGG ACGGCGTATC CGTATGCCAC GCAAAATAAA
AATGATTATT TTAATTTGCT TGCCGTTTAT CTTGACGCGT CATTTTTCCC AAATATTCAT
CCGCTCGATT TTGCCCAAGA AGGCATCCGT GTTGAATTAG ACGAAAGTGA TAAGCCGCAA
TTTAAAGGTA TCGTCTTTAA TGAGATGAAA GGCGCGATGA GTGGTGAGAT TGATCAGCTA
TATCATACGG TCGCCCATCA TTTGTTCCCA ACGACGACCT ATCATTATAA TTCAGGCGGT
GATCCTGCTG ATATCCCAGA CCTGACTCAT CATGAGCTGG TTGAATTCCA TCAGAGCCAT
TATCATCCGT CGAATAGCGT GATTATGAGC TTTGGTAATA TTCCGGTCGC TGAGACACAA
GCAAAAATTC ATGACGATGC CTTGATTGAG TTTGAAGCCG GTAAAAAACA CGTATCGCGT
CCAGAGCAGC GTTTGTCTGC GCCGATTAGT GCCACTGATA CTTATACCGC TGACGAAGCC
GGTCCTGATC AAACACATCA CGTACTTGCC TGGTTATTAC CATCGATTAC TGATTCGAAG
CAGCGTTTAG CACTGCGTTT ATTAGAAGGC GTATTGATTG AACATGCTGG CTCGCCGCTA
CGTGCGTATC TGGACAGCCA TCCGCTAGGC AAAGCGCCAA GTCCGTTATT GGGGCTTGAT
GACAGTCATT ATGAAATGGT CTTTTATACG GGTCTGCGCG GCTCAAACCC TGAGCATGCT
GAAGCGGTAG AGCAGGGCAT TATTGATTTG CTAACCGAAG TTGCAAGCTC GCCAGTCGAT
GATGAGACTA TTGAAACCAT TTTGCATCAA ATTGAGATAG ATCAGCGTCA TATCGGTGGT
GATAGCATGC CGTATGGTCT AAATTTAATG TTAGAGGGCT TTAGTACGGC GATTCATGAT
GGCAATCCTA TTGATGTCTG GGAAGTTGAT GAGCATCTAC AATGGCTACG TGAGCAAGTA
AAAGATGAGC AGTGGCTACC AAATTTAATA AAAATGCATC TGTTAGACAA TCAGCATCGT
GTGCGCGTCA CAATGACGCC AGATAGCGAA AAAACAGCCC GTCTTGCGGC AGCTGAACAA
ACACGTCTTG ATACCATCGA GATGGGTTTG ACCGCTGATG ATAAAGATAT CTTAAAGCAG
CAAGCATTAG ACTTAGCAGC ACGCCAAGCA GCGCCTGATG ATTTAAGCTT ATTACCAAAA
GTGGGTCTAG AAGATGTACC GACCGATATT AGCTTTAAAC AAGGCACGCA AAAGCAGGTT
AATCTAAGCG GAAAAGAAAG CACGTTGTTT GAATATGAAG CGGGCACTAA CGGCTTGTAT
TATTATCAAA TAATCGTACC GTTAACCGAT GAGATTGGTC AGAACCTCGT TAATAATGGC
AATGAAGAGC TGCCAGTCAA TGAGGTGATC AATCATCCAT TATTGCCAAT TTATTTGAGC
TTATTGTCAG AGCTGGGTAC GGATTCGCTC AGCGCCCATG AAATGCAAGC CAAGCAAGCG
GCGCATTCAT CTGGCGTGAC CGCCCGTATC AGCCAACGTA CCAATCTCGA TGACAGTCAA
GCGATTAGTA GCTATTTTGT GGTGGCAACG CGTGCGCTAA ACCGCAAGCC TGAAGCAATT
GATTTGCTCA AAGAGGTGAT GGAGCACAGC ATCTTTAGTG AGCATGACCG CATCAAAGAA
ATCTTACAGC AGCGTCAAGC AGGCTGGCAA TCAAATCTTG CCGGTTCAGG GCACTCCTAT
GCGATGCAAA CTGCCAGTCG TGGCATGAGT CGTCAAGCGC AGCTAGAGTA TGTACGCAGC
GGTCTACCGG CATTAAATGC ACTAAAAGAC TTCCTAACGC ATGCGAATAC CGATAATGCA
CAGTGGGATA AATTGGCAAC AAGCTTGATG GATTTACATC AACGTTTGAT TGGTTTGCCT
AAGCACGCAG TCATTATTTG CGAAGCGGAG CAAACCGAAC GCTTAAGCAA TTTGATTGTC
GATAGCTGGA AGGACAGTCA AGCGTCGAAA ATGGCTGAAA AACTCAGTAA TTCTACGACA
GATATTGAAG CAAATATTCC AAGTGAGTTT ACAGAGTTAC CGCTGAATGC CGCATTAAGT
GGTGAAAATA CGGCTGCAAT AGAAGAGGTA GAAGTTGAAG ATTTGGCATG GTTGGTTCCG
ACTAACGTCT ATCATAATGC CAGTGCTTAT ACCGTACCAG CGGCTGATCA TCCTGACACG
GCAGCCCTGA TGGTATTAGC GCCGTATCTG CGTAATGGCT ACCTGCATAG TGCCATTCGT
GAGCGCGGTG GTGCTTATGG CGGCGGTGCA GGTTACGATG CCAATGCTTG TGCTTTTAAA
TTCTTTAGCT ACCGCGATCC GCAGTGTGCT GAAACTTTTG CGCATTTCGA TGCCAGTATC
GAATGGTTGT TGAATGAGCC ACAAACGGAT GAGCAGTTGG AAGAAGCCAT TTTAGGGATT
ATCTCAGGTA TGGATAAGCC CGGCTCTCCA GCAGGCGAAG CAATCAAAGC CTGCTTTGCT
GACTTACATC ATCGCGGCAT AGACTGGCAG CGCAAAATGC GTGCCGCCAT CTTAGCGGTT
ACGGTTACTG ATTTACAGCG CGTAGCGAAA CAATATCTGC AAGGGCAAAA ACACGTGCGT
GCGGTATTAG CGCCCTATGA TAAAGAAGCT GCTGTAAAAG AGTTAGGCTT TAATGTTTGT
AAAATTAAAA GCTAG
 
Protein sequence
MTDTPFTADL TLHPAFELLE HRHIDALSMD VLISQHVKTG AMHYHLAHPS DENAFLVGFR 
TQPMDSKGEA HILEHVALCG SKKFPVRDPF FSMIKRSLNT FMNAMTAADW TAYPYATQNK
NDYFNLLAVY LDASFFPNIH PLDFAQEGIR VELDESDKPQ FKGIVFNEMK GAMSGEIDQL
YHTVAHHLFP TTTYHYNSGG DPADIPDLTH HELVEFHQSH YHPSNSVIMS FGNIPVAETQ
AKIHDDALIE FEAGKKHVSR PEQRLSAPIS ATDTYTADEA GPDQTHHVLA WLLPSITDSK
QRLALRLLEG VLIEHAGSPL RAYLDSHPLG KAPSPLLGLD DSHYEMVFYT GLRGSNPEHA
EAVEQGIIDL LTEVASSPVD DETIETILHQ IEIDQRHIGG DSMPYGLNLM LEGFSTAIHD
GNPIDVWEVD EHLQWLREQV KDEQWLPNLI KMHLLDNQHR VRVTMTPDSE KTARLAAAEQ
TRLDTIEMGL TADDKDILKQ QALDLAARQA APDDLSLLPK VGLEDVPTDI SFKQGTQKQV
NLSGKESTLF EYEAGTNGLY YYQIIVPLTD EIGQNLVNNG NEELPVNEVI NHPLLPIYLS
LLSELGTDSL SAHEMQAKQA AHSSGVTARI SQRTNLDDSQ AISSYFVVAT RALNRKPEAI
DLLKEVMEHS IFSEHDRIKE ILQQRQAGWQ SNLAGSGHSY AMQTASRGMS RQAQLEYVRS
GLPALNALKD FLTHANTDNA QWDKLATSLM DLHQRLIGLP KHAVIICEAE QTERLSNLIV
DSWKDSQASK MAEKLSNSTT DIEANIPSEF TELPLNAALS GENTAAIEEV EVEDLAWLVP
TNVYHNASAY TVPAADHPDT AALMVLAPYL RNGYLHSAIR ERGGAYGGGA GYDANACAFK
FFSYRDPQCA ETFAHFDASI EWLLNEPQTD EQLEEAILGI ISGMDKPGSP AGEAIKACFA
DLHHRGIDWQ RKMRAAILAV TVTDLQRVAK QYLQGQKHVR AVLAPYDKEA AVKELGFNVC
KIKS