| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1765 |
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| Symbol | |
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| ID | 3515733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 2173190 |
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| End bp | 2175409 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637670461 |
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| Product | soluble lytic murein transglycosylase |
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| Protein accession | YP_265047 |
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| Protein GI | 71066320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC CGCAGGTTGC TCCTGATATG ATTGATAAAA ACACCTATCA AAATGAGACG
CACAAGAGGT CTAAAAAAAT GACGCTTAAA AAAAGCGCAC TGAGCTTGGC AACGGCAGTG
GGTGCCTTAG GCTTATCGCA AGTGGCTTGT GCAGAATTGA CATGGGGCGA GGGCGGTAGT
GCTGAGCAAG AAGGCAAATA TCAAGTAGAG CGCTATCAGC CTGATGGTTA TCAACCAAAT
AGTCAACCAA ACAGTCAGCA AAGCACTTCT CAACCAAACA ATGTGCAACA AAACAATGCT
TATCAATCAG ATAATGGTGT GGGTTCATTC ACCGCAGCAG CCATTGCGGC AGAACGTGGC
GATGTCAATG CGCTTTATAA TTATGAGCAA GCTATGAGTG GTGGCTTATT TGCCATGTAT
CCTACTTACT GGCGGATGAA TATAGATTTG AATTCGCAAA GCCCTGCGGC AGTGTCGCAG
TTTGTTCGCC AATATCCAGA TACGGCCATG GCAGAAAAGC TGGCTGCTGA CTTTGCTGAA
ACTAAAGCAG GTTCAAATGA TTATGCAGCA GTGCGACAAG TGGCAAATTT GATTACCAAT
GCAGATGATA GTGAGCGCTG TGCCGTTGCG CTTGGGTTTA ATGATGGCGG CGATACCATG
CGTGCTATGG CAGCAAAATC TGATGTCTGG TTGACCACCA AAAAACAGCC AGCCCTTTGT
GATCAGCTAG GGCTTGAGAT GAATAATAAC GCCCTAATTA GCAATCCAGA GAGAGTCTCT
CGCCTCAAAC GTATGCTGCG TACAGGTAAA ACGGGCGATA TCATAGCACT GTCTTCGCGT
TTGGGCAGCT CTATTCCTTA TGCGTCACTG AGTGAGATTC AGCTCAACCC ATCATCGTTC
TTTGGCCGTT TTGCCCGTGA GCCTGCTAGC CAAACCAATC AATATTTGTA TTTATATGCC
ATGGGGCGTG TCGCTGAAAA GTCTTATCGT GAGGCGGCGT TGCAGTTGGA TTTTGATATC
AAGCAAGACA ATCAGCGCTC AGTTAAATTA TTAAATGATG ATACCCGTCG CGCAGCCTAT
CGTACTCTTG GTGTACAGCG CATGAATCAC AATACCGATG ATGGCTTTAA CGTTGAAGCA
GTCGACTGGT TCCGTAACAG CTTAGATAAT GACTTTAGTT TTGAAGAAGC AGAATATTAT
GCCATGGCAG CGATTCGCTT TAGTCGTTGG GATGATGTGG TCGAAGCCAT CTCGAGAATG
GATGCCGAAA CTCAAAAAGC CAATCAATGG CAATATTGGC TGGCGCGCGC TTATGAGCAA
TCAAATGATG GCAGCAAGCG TAATACCGCT AAGAAAATGT ATCAAAATCT TGCCAAAAGT
AATGAGTATT ATGGTTTGAT GGCAAAAGAA AAAGTCGGTC AACGTTTTGA TGCCAGCCGT
TTGGGTGGTA GTAACTTACC TAATGTCAGT AGCGAGGGTC GTGCTCGGGT CATGCAAAAT
CCACATTTTG CCCGCGCATT TTCTCTATAT AACGCTGATG CCAGCCGTTC TTATGCCAAT
CGTGAGTGGA ACTGGGCGGT AAAAAAAGCA CGTGATAACC GTGATGAAGA ATTAATCATT
GCAGCAGCGC GTCAAGCTTA TGATATGGGC TGGCTTGACC GTGCGATATA TGCCATTGAT
AATACCGACA ATGTAAACAG CCTTGCGATA TCGCATCCGA TGCCGCATCA AGATGCTGTG
GTTCGCTACA GTCAGTCTGC CGGTATCGAT CCCGCTTGGG CATATGGTAT CATGCGTCAA
GAGAGCCGAT TTGTAGCCTC TGCGCGCTCA AATGTTGGGG CAAGTGGACT GATGCAAGTC
ATGCCAGATA CCGCAAAATA TATCGCCCGT AATTTGGGTG AGACATACAG CGCAAGTCGT
GCCAATAGCG GTGATACCAA TATTCGTTAT GGTACGTGGT ATATGGGTGA TATCTTTGGA
AAGTTAAACA GTCAGTCTGT ATTGGCAACG GCGGGCTATA ATGCTGGTCC AAACAACGCC
AAGCGTTGGC AGCCAACCTA TGGCTCATTG GCAGCGGATC AATATGTTGA ATCGATTGCC
TTTCCTGAAA CACGAAATTA CGTCAAACAC GTGATGGAAA ATGCCACCAT CTATAGTAGC
TTATTGGATA ATGGTCAGCC AATCACCCAG CGTATGGGTA CCGTACCTGC CGCATTTTGA
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| Protein sequence | MKKPQVAPDM IDKNTYQNET HKRSKKMTLK KSALSLATAV GALGLSQVAC AELTWGEGGS
AEQEGKYQVE RYQPDGYQPN SQPNSQQSTS QPNNVQQNNA YQSDNGVGSF TAAAIAAERG
DVNALYNYEQ AMSGGLFAMY PTYWRMNIDL NSQSPAAVSQ FVRQYPDTAM AEKLAADFAE
TKAGSNDYAA VRQVANLITN ADDSERCAVA LGFNDGGDTM RAMAAKSDVW LTTKKQPALC
DQLGLEMNNN ALISNPERVS RLKRMLRTGK TGDIIALSSR LGSSIPYASL SEIQLNPSSF
FGRFAREPAS QTNQYLYLYA MGRVAEKSYR EAALQLDFDI KQDNQRSVKL LNDDTRRAAY
RTLGVQRMNH NTDDGFNVEA VDWFRNSLDN DFSFEEAEYY AMAAIRFSRW DDVVEAISRM
DAETQKANQW QYWLARAYEQ SNDGSKRNTA KKMYQNLAKS NEYYGLMAKE KVGQRFDASR
LGGSNLPNVS SEGRARVMQN PHFARAFSLY NADASRSYAN REWNWAVKKA RDNRDEELII
AAARQAYDMG WLDRAIYAID NTDNVNSLAI SHPMPHQDAV VRYSQSAGID PAWAYGIMRQ
ESRFVASARS NVGASGLMQV MPDTAKYIAR NLGETYSASR ANSGDTNIRY GTWYMGDIFG
KLNSQSVLAT AGYNAGPNNA KRWQPTYGSL AADQYVESIA FPETRNYVKH VMENATIYSS
LLDNGQPITQ RMGTVPAAF
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