| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1567 |
|---|
| Symbol | |
|---|
| ID | 3515531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1918735 |
|---|
| End bp | 1919826 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637670259 |
|---|
| Product | lipid A biosynthesis acyltransferase |
|---|
| Protein accession | YP_264849 |
|---|
| Protein GI | 71066122 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
|---|
| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000862302 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.231532 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC CTGAACAATA CGATCCTAGC AAATCTACTT CAAAGAGCAG ACTGCCGTCA
CCAGATAGAC AGTCGACCGT AAAGTCGCCT ACTTTACCTG CTGGCACACC GACGATTACC
CAAACGCATA AGCGAACCGA TCAAGCAGAA AAAAAACCTT TTGAGTGGCA GTTTTTAATG
CCTAAGTATT GGGGCATTTG GCTATTATTT GCTATTTTTT TGCCGCTGGT TTATCTACCG
TTACGGTGGC AATTTTGGCT CGGTCGTAAG CTCGGTATTT TAATCTATAC TATAGTAGGC
TCACGTCGAC GTGATACCTC AATTAATCTC AAGTTGGCAT TTCCAGAAAA GCCAGAAGTT
GAACGTGAAC TGATGGCAAA ACAAGTCTTT GTCAATCAGG GCATTGGTGT GTTTGAAACT
TTATGTGCTT GGTTCCGTCC GAATGTCTTT ACCCGTACCG TATCTATCTC AGGGTTACAG
CATGTCATTA ATGCACAAAA TAATGGTCGC GCTGTTATCT TACTGGGTGC CCATTATACG
ATGCTTGATC TAGGCGGTAT GCTCTGTACC CAATTCTTCC CAATGGATGG TATGTATCGT
CCGCAGAATA ATGCGCTGCT TGATTGGTTT ATTTATAACG GTCGCACGAG TATCCTTAGC
AAACAAATCT CCAATCGCAA TATGCGTAGC CTCGTTGACT CTCTTAAAAA GGGTCATGTG
ATTTGGTATT CACCGGATCA AGATTACGGT TTAAAACCAG GCGTCATGGC GCCATTCTTT
GGCGTACCAG CGGCAACCCT TACAGCAACG CGGCGACTGG CAACATTAGG TAGTAAAGAG
CATCCACCAG CAGTAATGGC ACTACATACT TATCGGCAGA CGCCAGACAA TTTACCAAGC
GGTAAACGTC CCCATTATCA TCTGACGATT ACGCCAGAAT TAGATAACTA CCCTAGCAAT
GACGAGATTG CTGATGCCAC GCGGGTTAAT GAAGTGCTAG AAGGCTTAAT TCGTATCGAT
CCCACTCAGT GGATGTGGTT CCATCGCCGT TTTAAAAACG CTCCCGAAGG TCGTAGAGAT
ATCTATAAGT AA
|
|---|
| Protein sequence | MKAPEQYDPS KSTSKSRLPS PDRQSTVKSP TLPAGTPTIT QTHKRTDQAE KKPFEWQFLM
PKYWGIWLLF AIFLPLVYLP LRWQFWLGRK LGILIYTIVG SRRRDTSINL KLAFPEKPEV
ERELMAKQVF VNQGIGVFET LCAWFRPNVF TRTVSISGLQ HVINAQNNGR AVILLGAHYT
MLDLGGMLCT QFFPMDGMYR PQNNALLDWF IYNGRTSILS KQISNRNMRS LVDSLKKGHV
IWYSPDQDYG LKPGVMAPFF GVPAATLTAT RRLATLGSKE HPPAVMALHT YRQTPDNLPS
GKRPHYHLTI TPELDNYPSN DEIADATRVN EVLEGLIRID PTQWMWFHRR FKNAPEGRRD
IYK
|
|---|
| |