| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1531 |
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| Symbol | dxr |
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| ID | 3515492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1873245 |
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| End bp | 1874453 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670220 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_264813 |
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| Protein GI | 71066086 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0249495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATGA CCCAGCGTAT CGCCGTATTA GGCGCGACAG GCTCAATTGG CGACAGTACG
TTAGCCATCT TGGCGGCACA ACCACAGTAT TACGACGTTT ATGCGTTATC TGGCTATCAT
CGTTTAGATA AGCTGCTGGC TCTCTGTCAG CAGTTTGCTC CTAAGCGGGT TGGCGTACCG
ACAACCGCAG TCGATGACTT TGCCAAGCGT CTTAGTGCGG CAGGTCTAGA TATCGAGGTA
GTCGGCGGCG ATGCTGGTTT GGTAGATATT GCTACCGATT CGCAAACTGA TACGGTCGTT
GCTGCCATCG TGGGCGCCGC TGGTTTGCCT TCTACTTTAG CCGCCGCGCG AGCAGGCAAG
CGTATTTTAC TGGCGAATAA AGAAGCACTG GTCATGGCTG GGCAAGTGAT GATCAATGCG
GTCAAAACCC ATCATGCAAC CTTGTTGCCG CTTGATTCTG AACATAACGC TATCTTTCAG
TGCTTGCCAT TTGCCATCCA GCAGGATAAC ACCCAAATCC ACCGATCAAA TCATGGCGTG
CGTAAGCTAT GGCTGACGGC TTCTGGCGGA CCGTTTTTAC AGCAGTCTTT TACGCAGATG
CAGCAAGCAA GCGTCGCTGA AGCGGTCAAA CACCCAAACT GGTCGATGGG GCAAAAGATA
TCGGTTGATT CTGCCACGAT GATGAATAAA GGGCTTGAGC TGATTGAAGC CTGTCATTTA
TTTGATTTGC CTGAAAATAA GATAAATGTG GTGATTCATC CACAAAGTAT CATTCACTCA
ATGGTAGAAT ATAGCGATGG CAGCTTTTTG GCGCAGCTTG GCAGCCCAGA TATGAAAACG
CCCATTGCCC ATGCACTCAG TTATCCCGAT CGTATTGACA GTGGCTCGCA GCCATTAGAC
TTATTTGCGC TCAATGGTTT AGAGTTTATC GAGCCTGATT TGCAAAAGTT TGCCTGCTTG
CGTCTGGCAC GAGAGGCTAT GCAAGCGGGT ACGCACGCGA CCATTATTTT AAATGCGGCG
AATGAGATTG CAGTGTCGGC ATTTTTGAAC AATAAGATTC GTCTGACGGA TATTGCTGAT
ATTAATGAGC AAGCATTGAA TGAGATACAA GTGCCGTTAT TGACTGAGAC GGCCGATATT
GATGAGATTT TGGCGATTGA TAATCTAGCA CGTCAGTATA CTGATAAGCT GGTGGCAAGA
TTGGCCTAG
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| Protein sequence | MVMTQRIAVL GATGSIGDST LAILAAQPQY YDVYALSGYH RLDKLLALCQ QFAPKRVGVP
TTAVDDFAKR LSAAGLDIEV VGGDAGLVDI ATDSQTDTVV AAIVGAAGLP STLAAARAGK
RILLANKEAL VMAGQVMINA VKTHHATLLP LDSEHNAIFQ CLPFAIQQDN TQIHRSNHGV
RKLWLTASGG PFLQQSFTQM QQASVAEAVK HPNWSMGQKI SVDSATMMNK GLELIEACHL
FDLPENKINV VIHPQSIIHS MVEYSDGSFL AQLGSPDMKT PIAHALSYPD RIDSGSQPLD
LFALNGLEFI EPDLQKFACL RLAREAMQAG THATIILNAA NEIAVSAFLN NKIRLTDIAD
INEQALNEIQ VPLLTETADI DEILAIDNLA RQYTDKLVAR LA
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