| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1528 |
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| Symbol | lpxD |
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| ID | 3515489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1867949 |
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| End bp | 1868986 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637670217 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_264810 |
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| Protein GI | 71066083 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0000334554 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00799179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCAATAC TAATACTTAC TATGATAACG ATTGAGCAAC TCATCTCCCA GATTGAGCAG
CGTCAGCCTG TTCTTAACAA GGCTGAGCTT AACGCTGAGC AGCGCCGTCT AAGCTTAAAG
GGTATTGGTA ATTTAATGAT GGCCAATCGC CAGCAGTTAA GTTTTTTGGC CAATCCTCAT
TATCTCTCCA GTTTGGCTAA TACTCATGCT GGGGCAGTAC TTATCACTGC AGAGCATCAT
AACGAAGCGC CAAATGATAC AGTCGCCTTA ATCGTTGCTA GCCCTTATTT GGCTTATGCT
AGCGTGAGTC AACTTTTTGC TCGTCAACCC TCAGTCAGTG GTATTCATCC AACAGCCGTC
ATCGCCGACA GTGCCGTTAT TGGCAATCAA GTGACTATCG GCGCTTTTTG TGTCATCGGT
GAGCAAGTAC AGATTGGTGA TCGCAGCGCC CTTCAGGCTC ATGTAGTCGT CGAGGACAAT
ACTGCTATTG GCACAGATTG CGTTATCAAG CCACAAGTGG TGATAGGGCA TGATTGTATC
ATTGGTAACC ATGTCAGGTT GCACGCTGGG GTGAGCATCG GCTCAGAAGG CTTTGGCTTT
GCACCCACCA GAAATCCTAG TGTTACAGGT TGGGAGCGTA TTGCACAGTT AGGGCGTGTG
CTGATAGGTA ATCATGTACG CATTGGCAGT CAAACCTGTA TTGATCGGGG TGCTATCGAT
GATACGGTGA TTGGAAATCA TGTTATTATT GATAACCTCG TACAAGTGGC ACATAACGTC
CGTATCGGTG ATGGTACTGC TATCGCTGCT CATACAGGTA TCGCGGGTAG TACCAGTATT
GGCAAACGCT GTATCATTGG CGGGGCGGTT GGTATTACGG GACATATTGA TATCACAGAT
GATGTTACCT TGTCTGGTAT GACCATGGTC ACCAAGTCAA TTACCACCGC CGGATCGTAC
TCTTCTGGAA CTGCCGCTAT GCCAACTACT AACTGGCGCC GTGCTGCAGT AAGATTTCGC
CAGCTTGGTC GTGATTAG
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| Protein sequence | MPILILTMIT IEQLISQIEQ RQPVLNKAEL NAEQRRLSLK GIGNLMMANR QQLSFLANPH
YLSSLANTHA GAVLITAEHH NEAPNDTVAL IVASPYLAYA SVSQLFARQP SVSGIHPTAV
IADSAVIGNQ VTIGAFCVIG EQVQIGDRSA LQAHVVVEDN TAIGTDCVIK PQVVIGHDCI
IGNHVRLHAG VSIGSEGFGF APTRNPSVTG WERIAQLGRV LIGNHVRIGS QTCIDRGAID
DTVIGNHVII DNLVQVAHNV RIGDGTAIAA HTGIAGSTSI GKRCIIGGAV GITGHIDITD
DVTLSGMTMV TKSITTAGSY SSGTAAMPTT NWRRAAVRFR QLGRD
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