| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1456 |
|---|
| Symbol | hemK |
|---|
| ID | 3515417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1766870 |
|---|
| End bp | 1768045 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637670145 |
|---|
| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
|---|
| Protein accession | YP_264738 |
|---|
| Protein GI | 71066011 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000347757 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.132252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG ACCAAGTAAT GAGCGCAGAA GAATTTCAAA ATCAATACTT TAATGATGAT
GAGTCACAAG GTATCAATGG TGATATGGAA TACGATTTAG AGACAGGGCT TGTCGGTGAG
CACGATGAAT TTGCGACTTT ACGTGCTGAG CTTGAAGAGG CACGTGAGCA ACTGGTCACT
ATCCGCGACT TTATTCGTTT TTCGGTGACG CAATTACGCA ATTATGATGT GGTTGTCGCT
CAAGGCACCA CCGATGAGTT TGCAGAAGCG TCTGCGATTG TATTGCATTC ATTGTCTTTA
GATTGGTCAG CCAACGATCA GATTCTTGAT TGCCGCTTGA CCACATCAGA GAAGCAACTG
GTTCTAAGTT TATTAGAAGA GCGTATCGCT GAGCGTAAGC CGTTAAGCTA TCTGATTAAT
TTGTCTTATT TCTGTGATTT GCCTTTTTAT GTTGATGAGC GCGTATTGAT TCCTCGCTCA
CCCATCGCTG AATTGATTCG TCAGCAGTTC CATCCGTATT TTGATGTGAC TGAATTGGCA
AAGCCGCTTG GCGTCTGTGT TAATAACCAA ACGCCCACTT TTTTTGACCA TGGCTTAGAG
ATCAAACAGC TGTCACAGCC TGAGCGTATT TTAGATTTAT GTACAGGTTC GGGTTGTATC
GCTATTGGGC TTGCGACCCG TTTCGTCGAT GCTTTGGTTG ATGCCGTTGA TATTGATAAA
GGCGCACTTG AAGTGGCGAT GGTCAACGTC GATCATCATG ACCTTGGTCA TCAAGTCAAT
GTCATTGAAT CTGACTTATT TGCTAAGATT CCTGCTGAAC ATCAATATGA GCTGATTGTT
ACCAATCCTC CGTATGTCGA TGCTGCCATC ATGGCAGACT TGCCGCCTGA GTTTTTATAT
GAGCCTGAGC ATGCGCTAGC CGCTGGTCAA GATGGGCTGG ATTTGGTACA TCGCATTCTT
TTTGAAGCGC CAGATTACCT TAGCCCTGAA GGTTTGCTGG TTTGTGAAGT AGGTGATAGC
GAGTGGGCGT TAAAGCAAGC TTATCCTGAG ATTCAGTTTG ATTGGCTAAG GTTTGCTCAC
GGCGGTCATG GTATCTTCGC GATGACTTAT GATGAGCTTA TGAATTACCG TCAGCTGTTT
GCCACTTATG TACAGCTGTT AGATAGCAAT CAATAG
|
|---|
| Protein sequence | MSEDQVMSAE EFQNQYFNDD ESQGINGDME YDLETGLVGE HDEFATLRAE LEEAREQLVT
IRDFIRFSVT QLRNYDVVVA QGTTDEFAEA SAIVLHSLSL DWSANDQILD CRLTTSEKQL
VLSLLEERIA ERKPLSYLIN LSYFCDLPFY VDERVLIPRS PIAELIRQQF HPYFDVTELA
KPLGVCVNNQ TPTFFDHGLE IKQLSQPERI LDLCTGSGCI AIGLATRFVD ALVDAVDIDK
GALEVAMVNV DHHDLGHQVN VIESDLFAKI PAEHQYELIV TNPPYVDAAI MADLPPEFLY
EPEHALAAGQ DGLDLVHRIL FEAPDYLSPE GLLVCEVGDS EWALKQAYPE IQFDWLRFAH
GGHGIFAMTY DELMNYRQLF ATYVQLLDSN Q
|
|---|
| |