| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1415 |
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| Symbol | |
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| ID | 3515373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1712659 |
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| End bp | 1714158 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637670102 |
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| Product | SSS family Na(+)/proline symporter |
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| Protein accession | YP_264697 |
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| Protein GI | 71065970 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.631202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGGAG TTTCTAGTGG CGTGCTAATA TCACTTGGCG CCTATTTCTT AGTGATGATT
GGGATTGGGG TTTACGCTTA TTTTAAGCAA GCCAATGATA CTGAAGGCTA TATGCTTGGC
GGTCGTAGCC TCGGTCCTGC AGTAACTGCT TTATCCGCTG GTGCGTCAGA TATGTCCGGT
TGGTTACTAC TTGGTTTACC GGGCTATATG TATGCCGATG GAGTCGTGAG CATATGGATT
GCGCTCGGTT TGACATTGGG TGCATTTTTA AACTATCTAA TCGTGGCACC GCGCTTACGT
GTTTATACTG AGATTGCAGA CAACGCCATC ACATTACCTG ACTACTTTGC GAACCGCTTT
GAAGACAAAT CACACATGCT GCGTGTTATC TCAGCAGTGG TCATTATTTT ATTCTTTACC
GTCTATACCG CAGCCAGCTT AGTTGGTGGT GGTAAACTTT TTGAAAGCTC ACTCAACCTC
TCTTATAGCA CGGGTCTATG GGTGACTGCT GGTGTGGTCG TCGCCTATAC ACTATTTGGT
GGTTTTTTAG CCGTGTCAAT GACTGACTTT GTACAGGGCA TCATCATGCT GTTTGCGATG
GTCATCGTAC CTGTCGTCGC CTTTACAGAC TTAGGTGGCA TTTCAGCCAC AACTGAGGCG
GTCAGAAATA TCGATCCAAG CCTACTCAAT GTTACCAGTG GCATGACGAT CCTTGGCATT
GTCTCGTTAA TGGCTTGGGG TTTGGGATAC TTTGGTCAGC CACATATTAT CGTGCGCTTT
ATGGCTATTC GTTCAGTTAA AGATATACCA ACAGCACGTA ACATTGGTAT GAGTTGGATG
ATTGTTAGTT TAATTGGTGC ATTGATGACT GGTTTTGCGG GTCGTGCTTA TGTACAAAAA
ACAGCGATGA CTTTAGATGA TCCTGAAACT ATCTTCTTAG TATTTACACA GTTTTTATTC
ACACCACTGG TTTCAGGTTT CTTGTTAGCC GCTATTTTAG CCGCGATTAT GAGTACGATA
TCATCACAGC TATTGGTCGT ATCAAGCTCA TTAACTAAAG ATGTATATAA GCTGTTTTTT
GATAAAGATG CACCAGAAGC ACGTCAAGTC ATGGTGGGTC GTCTTTCAGT TATCGTGGTC
GCAATAGTTG CCATTTTGCT GGCTTCTAAT CCTGAAAGCT CTGTATTAAG TTTGGTCTCT
AACGCTTGGG CAGGATTTGG TGCAGCCTTT GGACCGTTGG TTATTTTCAG TCTTATCTGG
CGCGGTATGA ATCGAAACGG TGCAGTTGCT GGCATGGTCG TTGGTGCATT AACTGTCATC
TTATGGATTT ATGGTCCTTT CCAGATGAAT GGTATGGCGC TGAATAGCTG GTTATATGCA
ATCGTTCCGG GCTTTGTCTT AAGTACTATC GCCATCTTTG CTGTTAGTAT CATGACGGGT
GGTCCAAAAG CGTCCGTCTC AGCGAAGTTT AAAGAGATGG AAATGAACTT AGACCAATAA
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| Protein sequence | MNGVSSGVLI SLGAYFLVMI GIGVYAYFKQ ANDTEGYMLG GRSLGPAVTA LSAGASDMSG
WLLLGLPGYM YADGVVSIWI ALGLTLGAFL NYLIVAPRLR VYTEIADNAI TLPDYFANRF
EDKSHMLRVI SAVVIILFFT VYTAASLVGG GKLFESSLNL SYSTGLWVTA GVVVAYTLFG
GFLAVSMTDF VQGIIMLFAM VIVPVVAFTD LGGISATTEA VRNIDPSLLN VTSGMTILGI
VSLMAWGLGY FGQPHIIVRF MAIRSVKDIP TARNIGMSWM IVSLIGALMT GFAGRAYVQK
TAMTLDDPET IFLVFTQFLF TPLVSGFLLA AILAAIMSTI SSQLLVVSSS LTKDVYKLFF
DKDAPEARQV MVGRLSVIVV AIVAILLASN PESSVLSLVS NAWAGFGAAF GPLVIFSLIW
RGMNRNGAVA GMVVGALTVI LWIYGPFQMN GMALNSWLYA IVPGFVLSTI AIFAVSIMTG
GPKASVSAKF KEMEMNLDQ
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