Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1402 |
Symbol | |
ID | 3515360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1696785 |
End bp | 1697495 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670089 |
Product | Pirin family proteins |
Protein accession | YP_264684 |
Protein GI | 71065957 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000212208 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0720528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACGA TCTATCATGC AGCAGATTCT CGTGGCGATG CCGACCATGG CTGGTTAAAA AGCAAGCATA CTTTTAGCTT TGCCAATTAC CATAATCCAG AGCGTATGGG TTTTGGCGCC CTACGTGTTA TTAATGATGA CTTCGTGATC GGTGGTCAAG GCTTCGGTAA GCATTCGCAC CGCGATATGG AAATTATCAG TATTCCGTTA TATGGTAAGC TCGGTCACGG TGATAACATC GGTAATAATG GCATTATCGA AACCGGTGAA ATCCAAGTTA TGTCAGCAGG TACCGGTATC ATTCATAGCG AGATGAATGG CCATGACAAA GAAGATGTGA AGTTCCTACA GATTTGGGTT ATGCCAAACC AAATGAACGT AGCGCCTCGT TACCAGCAAG TATGCATGGA TGACATCATG CAGCCAAACA AGTTTAACCA AATACTTTCA CCAAACCCTA ACGATGCAGG TGTATGGATT CATCAAGATG CTTGGTTTAG CATGGGTGAT TTTGATAAAG GTATCATCCA GACTTACCAG CTAAAAGACC CTAACAATGG CGTTTATATC TTTGTCATTA GCGGTAAAGT CGTTGTAAAC GGTAACACTC TGGATACCCG CGATGGTCTT GGCATCTGGG ATACTAAGAG CTTTACGATG GACATCATCG ATGATGCTAA AGTCCTATCA ATGGAAGTAC CAATGAGCTA A
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Protein sequence | MQTIYHAADS RGDADHGWLK SKHTFSFANY HNPERMGFGA LRVINDDFVI GGQGFGKHSH RDMEIISIPL YGKLGHGDNI GNNGIIETGE IQVMSAGTGI IHSEMNGHDK EDVKFLQIWV MPNQMNVAPR YQQVCMDDIM QPNKFNQILS PNPNDAGVWI HQDAWFSMGD FDKGIIQTYQ LKDPNNGVYI FVISGKVVVN GNTLDTRDGL GIWDTKSFTM DIIDDAKVLS MEVPMS
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