Gene Psyc_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1402 
Symbol 
ID3515360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1696785 
End bp1697495 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID637670089 
ProductPirin family proteins 
Protein accessionYP_264684 
Protein GI71065957 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000212208 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0720528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TCTATCATGC AGCAGATTCT CGTGGCGATG CCGACCATGG CTGGTTAAAA 
AGCAAGCATA CTTTTAGCTT TGCCAATTAC CATAATCCAG AGCGTATGGG TTTTGGCGCC
CTACGTGTTA TTAATGATGA CTTCGTGATC GGTGGTCAAG GCTTCGGTAA GCATTCGCAC
CGCGATATGG AAATTATCAG TATTCCGTTA TATGGTAAGC TCGGTCACGG TGATAACATC
GGTAATAATG GCATTATCGA AACCGGTGAA ATCCAAGTTA TGTCAGCAGG TACCGGTATC
ATTCATAGCG AGATGAATGG CCATGACAAA GAAGATGTGA AGTTCCTACA GATTTGGGTT
ATGCCAAACC AAATGAACGT AGCGCCTCGT TACCAGCAAG TATGCATGGA TGACATCATG
CAGCCAAACA AGTTTAACCA AATACTTTCA CCAAACCCTA ACGATGCAGG TGTATGGATT
CATCAAGATG CTTGGTTTAG CATGGGTGAT TTTGATAAAG GTATCATCCA GACTTACCAG
CTAAAAGACC CTAACAATGG CGTTTATATC TTTGTCATTA GCGGTAAAGT CGTTGTAAAC
GGTAACACTC TGGATACCCG CGATGGTCTT GGCATCTGGG ATACTAAGAG CTTTACGATG
GACATCATCG ATGATGCTAA AGTCCTATCA ATGGAAGTAC CAATGAGCTA A
 
Protein sequence
MQTIYHAADS RGDADHGWLK SKHTFSFANY HNPERMGFGA LRVINDDFVI GGQGFGKHSH 
RDMEIISIPL YGKLGHGDNI GNNGIIETGE IQVMSAGTGI IHSEMNGHDK EDVKFLQIWV
MPNQMNVAPR YQQVCMDDIM QPNKFNQILS PNPNDAGVWI HQDAWFSMGD FDKGIIQTYQ
LKDPNNGVYI FVISGKVVVN GNTLDTRDGL GIWDTKSFTM DIIDDAKVLS MEVPMS