Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1393 |
Symbol | |
ID | 3515351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1685585 |
End bp | 1686403 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637670080 |
Product | sterol desaturase |
Protein accession | YP_264675 |
Protein GI | 71065948 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.015069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.782198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATG AAATGTGGTG GCGTTTGGGC TTTTTCTTTA GCATATTAGT CATTATGATG CTCATTGAGC ATAGGCATCC CGCACGTCAA TCACCGATTA AAACCAGCAC ACGTTGGTTT GCCAATCTTG GGCTGGTATT TGCCTCTTCT TTTGTTGCCC GTTTGGCCGT TCCTATTGGG CTGACAACGG TAGCCATTTA TCATCAAAAA AATGGTATCG GTTTATTTAA TTTAATTGAG ATACCGAATG TCGCAGCTAT TATTTTAAGC TTCTTGTTGC TTGATATTGT CATCTACTGG CAACATCGCT TATTTCACCG AGTGCCACTT CTCTGGCGTT TGCACCGTGT CCATCACGCT GATGCGCATA TCGATGCCAG CACGGGGCTT AGATTTCATC CTATCGAGAT TGTCTTAAGC ATCTTGCTCA AGCTCGTTGT CATTAGCCTG CTTGGTGTCC CAGCTATAGC GGTACTCATA TTCGAAATTG CTTTAAATGG GCTGTCTATG TTTAATCATG CCAATATTCG CCTGCCACCA GTGATTGAGA AGCCATTACG CTTAATTTTA GTCACGCAAG TCTTACACCG TATTCATCAT AGCAAACGGG TCTGTGAGAC CAACTCCAAC TACGGTGTGA GTGTGACTTG GTGGGATAGG CTCTTTGGTA GCTATAAAAG TAACGCGTCA AAACCTGACC AAGCGTTAGA TATCGGTCTA ATAGAATATC CCGATGCCAA GCAAAATGCC TCGCTATGGG GATTACTGCT CATGCCATTT AAAGATAAAC ATGCTATAAA TCAATCCAAC CAAAAGTAA
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Protein sequence | MANEMWWRLG FFFSILVIMM LIEHRHPARQ SPIKTSTRWF ANLGLVFASS FVARLAVPIG LTTVAIYHQK NGIGLFNLIE IPNVAAIILS FLLLDIVIYW QHRLFHRVPL LWRLHRVHHA DAHIDASTGL RFHPIEIVLS ILLKLVVISL LGVPAIAVLI FEIALNGLSM FNHANIRLPP VIEKPLRLIL VTQVLHRIHH SKRVCETNSN YGVSVTWWDR LFGSYKSNAS KPDQALDIGL IEYPDAKQNA SLWGLLLMPF KDKHAINQSN QK
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