Gene Psyc_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1380 
Symbol 
ID3515338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1665583 
End bp1666260 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content39% 
IMG OID637670067 
Producthypothetical protein 
Protein accessionYP_264662 
Protein GI71065935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0126291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTAG ATAGTATCTT TGAAGATAAA CAGACTCTAA AAAACGATAT TAACGAAGAG 
TGTAATGATG AGCTTCAGAT AAAGCCCATA CCTTTAACTA CTTTATATAG GCCACAAGCA
GATAGCTATC GCCTGTCTGA GGTTGGGTTT ATTGTTATAG AAAATGGCTG GGATGAACAG
TCACTGCTAG CGTTAAAACA GCAAACAGGT TTGGGCACAT TGTTTGCGCT ACAAACCACA
GATAAGCACA TTGATAGATT CGAGGTTATA GACGGTATTA TTATTTGCAA AGCGGATGAA
GTCGGGCAGG TAACAACTGT ATTTGAATCA GTACTATCTG ATCGGGATAA AGTTGGTATA
GATGTTAATG ATATCAAGAA ATCCTGTGGG GCTGAGAAGC CTGCCAAGTT TATACAGGCT
AGGGTAACGG ACATACCAGA CCCAGAACAA GTAAAGAGTG CCGCTAATCA TCTGCTCAAT
CAAATTGCTA AAGGTCTTAG TATTGAGTAT ATGATGCTTC ATATTGAACG TAATCATAAG
TTATCTCTTG ATGAATTTTT TAGCGTCACA ACTGCGATTG AAAGCTGGAT TACTGACGAT
TCAGAAGTGT TTTACGGTAA TAGGATGATT GACAAGTCTG ACCATTGCTG GATGGGAGCG
ATATATGTGG CTGGTTAG
 
Protein sequence
MTVDSIFEDK QTLKNDINEE CNDELQIKPI PLTTLYRPQA DSYRLSEVGF IVIENGWDEQ 
SLLALKQQTG LGTLFALQTT DKHIDRFEVI DGIIICKADE VGQVTTVFES VLSDRDKVGI
DVNDIKKSCG AEKPAKFIQA RVTDIPDPEQ VKSAANHLLN QIAKGLSIEY MMLHIERNHK
LSLDEFFSVT TAIESWITDD SEVFYGNRMI DKSDHCWMGA IYVAG