| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1330 |
|---|
| Symbol | |
|---|
| ID | 3515287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1606444 |
|---|
| End bp | 1607469 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637670018 |
|---|
| Product | endonuclease/exonuclease/phosphatase family protein |
|---|
| Protein accession | YP_264614 |
|---|
| Protein GI | 71065887 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2374] Predicted extracellular nuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000015519 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATA ATAATGAAAG TAATCATAAG CAGTTTTATA TAGCAACAGC CAACCTGCTC
AATTTTGCCA ATCCAAATCG TCTCTATTAT CCAAATGCAC CTGCTTACAG TAATCATGAA
TACGAACATA AGTTGCGTGG TATCACAGAT CTACTATCAA AGGCACATGC TGATATCATT
GCGGTACAAG AAGTATGGGA CAGTGAGGCG CTAATCGCAT TGGCCGTATC ATTAGGTTTT
AAACCTGAGC ATGTGGTTAT TCCGCTGGCA AGTAATGATA GTGCAAGCCC CTATACGCAA
GGCAAAGGGG CGCAGAATAC CCCTGCTGTT GGGATCATTA GTCGGTTTGC GCACTTAGAG
AGTCGCTTAC TTGAAGATAT TTTGCCAAAA GCCATCATTA ATATTCCAGA TATAGGTCCT
TATCAACGCT TTAATCGTCC GCCACTTGTA TTACGCGTCG ATGCGTTTGG TCAGCCGATA
ACGATTATTA CCGCTCATCT GAAAAGTAAA CGTGCTTTTT TCTTACGTGA TGAGGCAGGT
AATTTGTTGG AAGATATGGA TGATCCAAAT ATTCGTATTC GTGCCAAGCT GCGTAGTTTG
TGTATGCGTG CTGCAGAAGC GGCTTCTATC AGGCTTTCTA TCATAGATAG GTTACAGCAT
ACTCGTGAGC CTTTGATTTT GCTTGGTGAT ATGAATGATG TGACCGAAAG CGTTACCACT
CAGTTGATGA CTGAGACTGG TGAAGTTAAT TATGACAAGA GCATGCGCGA CGTTGCCCTG
TTTGATGCTG CTCGTATTCA AGCCCGTTAT GGTTGGATGA AAGATGTGGC ATATACCCAC
ATTTACCAAG GTATGCCAGA AGTGATTGAT CAATTATTTG TCTCTGAAGA ATTTCTACCT
GATAGCAAGT TTTCGCTCGG TCAGGTTGAA CGCGTTGACT ATTTTAACGA CCATTTAAAG
TGGGATTATG CAGATAGAGT GATTGATCAT GGTATTATAA GAGCGAAAAT AAAGCTTCAC
AATTAA
|
|---|
| Protein sequence | MTNNNESNHK QFYIATANLL NFANPNRLYY PNAPAYSNHE YEHKLRGITD LLSKAHADII
AVQEVWDSEA LIALAVSLGF KPEHVVIPLA SNDSASPYTQ GKGAQNTPAV GIISRFAHLE
SRLLEDILPK AIINIPDIGP YQRFNRPPLV LRVDAFGQPI TIITAHLKSK RAFFLRDEAG
NLLEDMDDPN IRIRAKLRSL CMRAAEAASI RLSIIDRLQH TREPLILLGD MNDVTESVTT
QLMTETGEVN YDKSMRDVAL FDAARIQARY GWMKDVAYTH IYQGMPEVID QLFVSEEFLP
DSKFSLGQVE RVDYFNDHLK WDYADRVIDH GIIRAKIKLH N
|
|---|
| |