| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1312 |
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| Symbol | pilZ |
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| ID | 3515269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1582271 |
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| End bp | 1582618 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637670000 |
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| Product | type IV fimbriae assembly protein |
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| Protein accession | YP_264596 |
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| Protein GI | 71065869 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.826043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGC CAGGGCGTGG TGGGATTTTA ACCTGTCATA TTGAGAATAT CGATATGCTA
TATGCAAGCT ATCTGTCTTT TGTTACCAGT GGGGCATTGT TTGTGCCGTC TGATCGAGTG
CAAAAACTGG GTGATGAAGT CTTTATTGCT GTCACTTTGC CCAATTCTAG TGAGCGTTTG
CCCATGAATG GCAAGGTGAT TTGGGTCAAT TCTAAAACCC AAAGTAGTCG ACCAGTGGGT
TTTGCAGTAC AAATGGGCAC GGATATTACG GGACTAAGAA TCAAAAACGA AGTTGAGCGT
CTATTGACAG GTAAGATTGA TAGTTTGCAG GCTACTTATA CCATGTAG
|
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| Protein sequence | MAMPGRGGIL TCHIENIDML YASYLSFVTS GALFVPSDRV QKLGDEVFIA VTLPNSSERL
PMNGKVIWVN SKTQSSRPVG FAVQMGTDIT GLRIKNEVER LLTGKIDSLQ ATYTM
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