Gene Psyc_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1193 
Symbol 
ID3514091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1429877 
End bp1430809 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content47% 
IMG OID637669882 
ProductDMT superfamily efflux pump 
Protein accessionYP_264478 
Protein GI71065751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.516165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG CCTCTTCACG CGCCGCTGCT ACTGGCTTGC TCATTGGCTG TGTGATCTTT 
GGTTTGGGTA GCTTAATCGT CGCTCACGTT GACATCGGTG GCTGGGCGAT GGCGTTTTGG
CGCTTGGCTA TTTCAGGTGT GGTCTTTGCG GTATTAGCAA AAATGACAGG ACAGCGGCTG
CCTCGCTCAA AGCGTGCCAT TTTTTATGGC TTATTATCGG GTGCATTTTT GGGTTTGGAT
TTGGCGCTGT GGCATGAGAG TATCTATGCG GTGGGGCCTG GCATTTCAAC CTTACTCAAC
AGCTTGCAGA TTTTCTTTTT GGCAGCCATT GGTTTTCTAT ACTTTAATGA GCGCCAATCT
ATATTACAGC TCGTCAGCTT GGTCTTGGCA ATGTTGGGTG TGGCAATGAT TGGTAGCCCT
GAATTTGCAC AAAACAAGGC TGCTACTTGG GGGTTTATTA CAGGTATCGT ATCAGGGGCC
ATGCTCGCAG CATCAATGAC CTTTATCCGT AAAACCCATG ATACTGAGCC GACGCCGACA
TTCATGCTGA TGCAGCTGAT TAGTATTGGG GGCGTACTGG CAATGATTGT GCCGATGTTT
GTCTTTGATA TGGGTAATAT GCTGCCCAAT ACTTGGTCTG ATATTGGCTG GATATTGATT
TACGGTACGG TAATGCAGTG CCTAGCATGG GGGCTTATCG CCTACTCTAT TCCCAAGCTC
TCTTTGGCAT TAACTGGATT ATTATTATTG ACCGAGCCCG TTGCGGCATT GGTGATTGAC
TATACTTGGC TTGATAAGCC TATCAACACC CTACAGTGGA GTGGTGCGCT ACTCACTATG
TTTGCCATTT ATTTAGGTTC CCTAAAACCT AAACCACGCG CCCTACGCCG TTATCGGTTT
TTTGCACGAT TTTATAAGCG TGATTATAAA TAG
 
Protein sequence
MAIASSRAAA TGLLIGCVIF GLGSLIVAHV DIGGWAMAFW RLAISGVVFA VLAKMTGQRL 
PRSKRAIFYG LLSGAFLGLD LALWHESIYA VGPGISTLLN SLQIFFLAAI GFLYFNERQS
ILQLVSLVLA MLGVAMIGSP EFAQNKAATW GFITGIVSGA MLAASMTFIR KTHDTEPTPT
FMLMQLISIG GVLAMIVPMF VFDMGNMLPN TWSDIGWILI YGTVMQCLAW GLIAYSIPKL
SLALTGLLLL TEPVAALVID YTWLDKPINT LQWSGALLTM FAIYLGSLKP KPRALRRYRF
FARFYKRDYK