| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1183 |
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| Symbol | rarD |
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| ID | 3514081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1417607 |
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| End bp | 1418566 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637669872 |
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| Product | DMT superfamily efflux pump, RarD |
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| Protein accession | YP_264468 |
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| Protein GI | 71065741 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.297092 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCC AAAATGTCAT CAAAAAACCG GTTACTCCTA TTAAAACGAC CAGACACGGT
ATCGTCACCG CACTTATCGC CTTTTTTATC TGGGGCACTT TTCCTTTATA CTTTAAGCAA
TTATCGGACT ACAATGCCAC CGAAATTATT GGTCACCGCA TTGTTTGGAC GTTTACCTGT
CTACTGATTG TGCTGGTAGT GACTAAGCGT TGGCAGTGGA TTGACACGCT AAAGAAAAAT
CCTAGATGGA TTGCTTATAC TTTTATCTCA GGTATTATCA TTGCGATCAA TTGGCTCACC
TATGTATGGG CGGTCAACCA TGATCAGATT TTAGAAGCCA GCTTGGGCTA CTTTATTGGA
CCACTGGTTG GCGTGGGACT GTCAATGATT TTGTTCAAAG AGCGCCTGCG TACCTTACAA
TGGGTCGCCA TTGGCTTTGC GCTATTATCA GTCGTCATTC AAGTAGTCAT AATTGGTAGT
TTGCCATGGA TTTCATTGAT CTTAGCATTT AGTTTTAGTA CTTATGGCAC CATACAACGT
CAAACACCTC TGACAGCGGT CGATGCAATG TTTGTCGAAA CGGCAATGTT ACTGCCTATT
TTTCTAGCAT GGTTTTGGCA GTCTGATGTG GCGAGTAGTG ATATTAGCTT TTGGTTTACG
CCCTCGATTT GGTTACTCAT GCTGGCAGGA CCTATTACTT TGATACCGCT CTTAATGTTT
AATAAATCCA CCAAGCTTGT GGCTTACAGT CTCCTCAGCT TTATGAATTA TCTGACACCA
ACCTTTATTT TCTTTTTGGC AGTGTTCTAT TACAATGAGC CATTTGATTT ACATCGTTTG
GCAGTCTTTG GTTTAATTTG GCTGGGTCTG CTATTATTCA GTATTGATTT ATGGCGTCAT
CGCCCAAGTA AGCAGCTAAA AGCGGCGCGA CTGCGTGAAG AAGCATTATC TTCTAAATAA
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| Protein sequence | MTTQNVIKKP VTPIKTTRHG IVTALIAFFI WGTFPLYFKQ LSDYNATEII GHRIVWTFTC
LLIVLVVTKR WQWIDTLKKN PRWIAYTFIS GIIIAINWLT YVWAVNHDQI LEASLGYFIG
PLVGVGLSMI LFKERLRTLQ WVAIGFALLS VVIQVVIIGS LPWISLILAF SFSTYGTIQR
QTPLTAVDAM FVETAMLLPI FLAWFWQSDV ASSDISFWFT PSIWLLMLAG PITLIPLLMF
NKSTKLVAYS LLSFMNYLTP TFIFFLAVFY YNEPFDLHRL AVFGLIWLGL LLFSIDLWRH
RPSKQLKAAR LREEALSSK
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