| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1167 |
|---|
| Symbol | |
|---|
| ID | 3514065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 1394831 |
|---|
| End bp | 1395301 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637669856 |
|---|
| Product | acyl-CoA thioesterase |
|---|
| Protein accession | YP_264452 |
|---|
| Protein GI | 71065725 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.862365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTT TAGCAAAATT ACCGGAAATA CAAGAGACGC TTAATAAAGA CAGTAACCAT
CCCATGCATG GTTTTGCGGT TATTTACTCT CAACAAGTAG AGTGGGGTGA TATGGATTCT
TTTGGTCATG TCAATAATGT GGTCTATTAC ACTTATGCCC AAAACGCTCG TATTTACTAT
AACAGTCAAT TAAATCTATT TAATGAAAAG ACTTTTTCAG TCATGGCGGC ATCATCCTGT
CAATATTTCA AACCAGTGAC TTATCCTGAT ACCTTATGGG TCGGTGTCCG AGTCAAGAAA
ATTGGCAATG CTAGCTTGAT TCATGAATAT ACTTATTATA GTACTGCTAT GAATACTATT
GTCGCTAGCG GTGAGTCAGT GCTGGTGTAT CTTGATAAAT CCAGTGGACA AAAGAAAAAT
ATTGATGAAA CAAAAAAAGC GGCGATTACT GCTTTTGAAG GTGTTCACTA A
|
|---|
| Protein sequence | MKALAKLPEI QETLNKDSNH PMHGFAVIYS QQVEWGDMDS FGHVNNVVYY TYAQNARIYY
NSQLNLFNEK TFSVMAASSC QYFKPVTYPD TLWVGVRVKK IGNASLIHEY TYYSTAMNTI
VASGESVLVY LDKSSGQKKN IDETKKAAIT AFEGVH
|
|---|
| |