| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1127 |
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| Symbol | recB |
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| ID | 3514825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1342783 |
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| End bp | 1347270 |
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| Gene Length | 4488 bp |
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| Protein Length | 1495 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637669815 |
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| Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_264412 |
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| Protein GI | 71065685 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.225678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0443825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACT TTACCGACAC AAGCGATATA GTTGAACTTT CTACACAACC GAATTTATTC
GATGAGTACA TAGATGAGTC GCATCACTCA TTCGATACGC CGACTCATAC GCCTGAGAGT
GAAGGTATAA GTGCCGCTAT GAGTGAGCAG AAGGAAAATG TGATACCAGC GGTCGATGTT
GCGTTGACGG GTCAGCATCT TATCGAAGCC TCAGCCGGTA CTGGCAAGAC CTGGACACTA
ACCGGCATTG TGCTGCGCCT GCTGATTGAA GCGCGGCGTG CGCCAGAGCA AATCATCGCC
ACTACTTTTA CTCGAGCCGC TGCGGCCGAA ATGCGTCAGC GTATTCACGA CCGTTTGGTG
GATTTTTATC AATTGCTGCA GTGGGTTAAT AGCCTAAGTG CTGAACCCAA TAACAAGGAT
GCTTTGTATC CTGATGTACT ACAGGTGACT CCTGAAAGTG GCAAGGAGAA ACAAGCTGCC
AAAGGTTTAA GTACAGATTC AGATGCTGAA AAAGCTGCTG ATGAACCAAA TCAAGACCTT
GCCTATGACA AGCAGATCAC TGCTGAAAAA CGTGCACAGG CAAAAGAAAA GCGTAAAAAA
TGGCTAGTAG AACAGGCTAA ATACGCACGC TTAGATGGCA TTATGGAAGA TCCCATTAAT
CTGCATTTGG TCGGTTATTT GCTTGACCAT GTGCACAGCT ATCCAATGAC CGAGGCCATT
CGACGCACGG CACTGGTATT AACCACCTTG GATAAACTGT TTGTGGGTAC GCTCGATAGC
TTGGCGCAAA AGTGGTTGAT TGAATACAGT AGCGAGACGG GTCATCAGCA AGGCATGGCG
ATTATTGAAG ATAGCAGTAT CGAGCAAGTT ACTGACAGTA TTATTCATGA TGAGCTGCGG
CAGTTTCAAA GCAGACTGTA TCACGAGCAG CCCAAACTGT ATGCATTGAT GGATCAGCAA
GGCAAGCTGA CTGCGGTTAG CGATCATAAA AAATATGTGA CTCGTTCGCT TAACTTTATT
TCAGCGCCGA TTGATGAGAT AAAGCTGGAG CAAGGTTTTG ATTTTGTCTC GTATGAGCGA
CTACTTAATG AGTTTGCTCA GTTAGATTTA GTAGATATTC AGCCGTATTT AAACCCCGAT
TATAGAAAGT CTCAAGGGTT TAATGGTGCT TCTAATTTAT TCAAACAGTT TGATGCCATC
ATTGAGGTGC ATCAAAAGAT AGCGGAATAT AAGCTAGCAT TTACTAGCTA TTTAAATGAA
CGTGAGAACA AGATTCTTAC TTCATTGCAG GATTCCAGAT ACCCCAATGA AGATGGCAAA
ATTAAGAATT TTAATAAGAA TAAAGAGAAA GAGCATGAAA CTTTTTTCGA GTTAGAAACC
ATTAGTAAGT TAATGGCTCT CTTAGATATG GCTGATGGAC TAAATCAGCA TATTTTGTTG
GTATCAGCCA ATCTCAATCG TCATATCGTG CTTGCTGTGC GCGATAGATT GCCAATCATC
TTAGAAGAGC GCGGTGAGAC AACCTTTAGT TTACAAATGG CGCGCTTAAA CCAAGCGTTA
ACGGGTCGGC AAGGGGAGAA GCTGGCACGT TATATTCGAC ATCACTATCC GGTCGCTTTG
ATTGATGAGT CGCAAGACAT TAATGGCGAA CAGGCCATTA TGATTGAAAG TATCTATTTG
CCAAAGAGTA AGCGTAAACA GTTGGCGAAT GATAAGCCGT TATCCACTAA TAAAGTCAGT
CATGAGTTTT TACTGTTGGT TGGTGACCCA AAGCAGGCCA TTTATGGATT TCGTGGCGGT
GATGTAGCCA ATTATAACTA TATGAAAGCT CAGTTTGAGA AAAGTAGCCT TTGGACGCTC
GATATTAACC GCCGCTCAAA TGCCGGTGTG ATTGATGCAC TAAATTGCTG GTTTGGCATG
CCAACGGTAA CGACTGCTGA GAATAAATTA GCACAGTTAG GTAGCAGTAT TTATTATCAG
CATATCAAAG CTGATAAACC AGAAAACCAA CTTTCTTGGT TTAATGACCT AACCGTTCAA
AACAGTACTT TAGTGACAGA GATACTCTCT GCCCAACCAG TGAGCGTATT GCACCTACCT
TATGATAAAG AGCTTGAGTA TGATGAGCAT GAAATCACGG CGCGTCATAT TGCGACCTTG
CTCGGTAGTG GTCAGACGTT AAAAGGCAAA CCGATTCAGC CCAGTGATAT CGGCGTGCTG
GCACGTACTA AAAAAGACTT AAAACGGGTT GAGGATGAGT TGCTTAAACT CAATGTACCA
ACCTTGACAA CCAGTGATGT TAGTATCTTT GAAACCATCA TGGCCGAAGA TGTGGCGGCG
CTGCTGAGTG CCATGCTGTA CCCATATCGT CATGATATGA TTAATCGGGT GCTGACCAGT
CATCTGTATG GTCTGAGTAT TAAAGCCGTC AAAGCCATGA TGACTGACCA TGAGTCAGGA
GTGACAGAGA GTGGCGATAC GATAATAAGC ACCCATTCAA ATAGCACTAA TGTGAAAGCG
GTTGATAATA AAAAAAGCTA TCAAGACTTT ATTACCTATC TAAAACAAGC GGCTCAAAAC
TGGCAGCACT TTGGTATCTT GTCAGCACTG CATTACTTAT TAGATAAAAA TCCCGTGCAG
CCGCAAGGCG TTTGGCAAGC TCTGGCGGCT CATCCAGAAG GCGCTCGTCA CATCATGGAT
TTGCGTCATA TGATGGATGT CTTGGCGCAG TATGGTATCG GCATGGGTGA GCATGAATTA
TTGGCTTGGT TTAGACAAAA TATAGAGGCT GCTCCTAACA GCGATTGGGC TAAGCAGTAC
CCGCTACCCA CAGAGTCTGG TGTACAACTT ATGACCATTC ACAAGTCCAA AGGGCTTGAG
TTTCCCATTG TCTATGTATT GGGTATGGGA GATGCCAGCA GGAAGTCGGG TAATAAAGAA
GACTATGGGT TGTATCTGTA TAACGCCCAA CAAAATCCGT CAGCTTTAGT GCAGCAATCA
ACAAGCAATC AGCGCCGCTT CTCACCTGTG AAAGGCTCTG CCACCACAGA GGGTTACTAC
ACCGATATTG AGACACAAGA GGACTTTGAT GAGCTACGTA GGCTTGGCTA TGTGGCATTT
ACTCGTGCCA GTGAGCAGCT TTATGTGGTG TTACGAGATC CCAATAGCAA AACAGGTTTT
GAATTAAAGC CTGTTTTCTA TTGGTTTGAC GCTCCCGAGG CAAAGTTTGA TTTGCCTGAT
AGACTCAAAG GCACCATAGG TATGATCAGA GGGCATAAGG TCAATGAGTT CTATAACGAT
GATACTAATG CAGTAGGCTT AGCGGGTAAC ACAACGCTTG CCACTGCCAA GCCCATAACA
GAGGCTATTG AGTATGCTGC TTTTTCAGAG GTCATGAAAA CAGATTACTT TTATGGTTGG
GCCAAGACCA GTTTTACGGC TTTAGCTCGT CAGCTAGATG AATCTACACA GGCGCTGGCT
GTGGTAGATG AACGTATGGA TGATGCCCTA GATATTGATA TAACAGAGTC GATAGTATCC
TTCAGTAGTA ATCAGTCTCT TGAACCAGTC AGTGATTTGA GCCTCAAATC AGAGGATGAT
ATCCGCTTTA CTTTTGTGAA AGGCGCCAAT GCGGGTACGT TTTTGCATGA GATATTTGAA
AAAATTGATT TCAGCAATAA ATCGCAGTGG TCTCAGGTGA TTGATAGAGC GGTCAGTAGT
TATCAGCTAC CTCTGGTTTA TAGTAGCGCT GAACAGCAAA GCCGACTACT ACAAGCAAAG
AAGAAAGAAG ACAGTCGTCC AGTGGATCTA AACTCAATAG ATGCTACAAA ACATGAGGCA
TTGATTGGCT GGATTGAAGA GGTGCTACAG GCGCCTCTAT TAGCGTCCAA TCAACCCTTA
CAGTCTATTC ATGCAGAACA GCGATTTGCT GAATTGGAGT TCAATATGGG GTTGTCAGAG
AGCTTTAAAG CACAGGATAT TAATAGACTC TTTCAGCAGT ATCTCCCAAA TGAGGCGGAC
AAACACGTCA ATCTTGTTCC ACAAAATAAA ACACATCTGT ATCGTTATTT ACGTGGTGAA
ATCGATTTAG TGTATGAGCA TGCTGGCAAG TATTACGTTG TCGATTATAA AAGTAATTAT
TTAGGAAATA GCCTAATTGA TTATGATGAA AGTACACTCA AGCAAGCAAT GTCAAAGGCA
GGATATTGGC TACAGGCCGC GATTTATCAA GTCGCATTAC ATCGCTTCCT TGCCATGAGG
ATTAGTGATT ATTCAGGTAA TGAAGATAAG TATCTTGGGG CTGTTGAATA TGTCTTTTTA
CGGGGCGTGT ATGACTCAGA CTCTCAAGCA GCCGCTGACG TATCACAAGA CGTTAATAAG
CCTGATAATA GCCTCTCAAT GCACAATGAA CGCTATGGAT TAGTCACTTG GGATATTCCA
ATTGAGTTTA TTAAGGCCTT AGATGCGTTA TTTGGCCTGC CAGATTAG
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| Protein sequence | MTDFTDTSDI VELSTQPNLF DEYIDESHHS FDTPTHTPES EGISAAMSEQ KENVIPAVDV
ALTGQHLIEA SAGTGKTWTL TGIVLRLLIE ARRAPEQIIA TTFTRAAAAE MRQRIHDRLV
DFYQLLQWVN SLSAEPNNKD ALYPDVLQVT PESGKEKQAA KGLSTDSDAE KAADEPNQDL
AYDKQITAEK RAQAKEKRKK WLVEQAKYAR LDGIMEDPIN LHLVGYLLDH VHSYPMTEAI
RRTALVLTTL DKLFVGTLDS LAQKWLIEYS SETGHQQGMA IIEDSSIEQV TDSIIHDELR
QFQSRLYHEQ PKLYALMDQQ GKLTAVSDHK KYVTRSLNFI SAPIDEIKLE QGFDFVSYER
LLNEFAQLDL VDIQPYLNPD YRKSQGFNGA SNLFKQFDAI IEVHQKIAEY KLAFTSYLNE
RENKILTSLQ DSRYPNEDGK IKNFNKNKEK EHETFFELET ISKLMALLDM ADGLNQHILL
VSANLNRHIV LAVRDRLPII LEERGETTFS LQMARLNQAL TGRQGEKLAR YIRHHYPVAL
IDESQDINGE QAIMIESIYL PKSKRKQLAN DKPLSTNKVS HEFLLLVGDP KQAIYGFRGG
DVANYNYMKA QFEKSSLWTL DINRRSNAGV IDALNCWFGM PTVTTAENKL AQLGSSIYYQ
HIKADKPENQ LSWFNDLTVQ NSTLVTEILS AQPVSVLHLP YDKELEYDEH EITARHIATL
LGSGQTLKGK PIQPSDIGVL ARTKKDLKRV EDELLKLNVP TLTTSDVSIF ETIMAEDVAA
LLSAMLYPYR HDMINRVLTS HLYGLSIKAV KAMMTDHESG VTESGDTIIS THSNSTNVKA
VDNKKSYQDF ITYLKQAAQN WQHFGILSAL HYLLDKNPVQ PQGVWQALAA HPEGARHIMD
LRHMMDVLAQ YGIGMGEHEL LAWFRQNIEA APNSDWAKQY PLPTESGVQL MTIHKSKGLE
FPIVYVLGMG DASRKSGNKE DYGLYLYNAQ QNPSALVQQS TSNQRRFSPV KGSATTEGYY
TDIETQEDFD ELRRLGYVAF TRASEQLYVV LRDPNSKTGF ELKPVFYWFD APEAKFDLPD
RLKGTIGMIR GHKVNEFYND DTNAVGLAGN TTLATAKPIT EAIEYAAFSE VMKTDYFYGW
AKTSFTALAR QLDESTQALA VVDERMDDAL DIDITESIVS FSSNQSLEPV SDLSLKSEDD
IRFTFVKGAN AGTFLHEIFE KIDFSNKSQW SQVIDRAVSS YQLPLVYSSA EQQSRLLQAK
KKEDSRPVDL NSIDATKHEA LIGWIEEVLQ APLLASNQPL QSIHAEQRFA ELEFNMGLSE
SFKAQDINRL FQQYLPNEAD KHVNLVPQNK THLYRYLRGE IDLVYEHAGK YYVVDYKSNY
LGNSLIDYDE STLKQAMSKA GYWLQAAIYQ VALHRFLAMR ISDYSGNEDK YLGAVEYVFL
RGVYDSDSQA AADVSQDVNK PDNSLSMHNE RYGLVTWDIP IEFIKALDAL FGLPD
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