| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1082 |
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| Symbol | |
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| ID | 3514968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1292149 |
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| End bp | 1293852 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637669771 |
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| Product | ATP-dependent DEAD/DEAH box RNA-helicase |
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| Protein accession | YP_264368 |
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| Protein GI | 71065641 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA TCTTATCTGC AATCGCTGCT GAAAACGGCA TTATCGAAAG CACTGACACC
CCAAACACTA CTGCAAATAC CGATACTAAT AATGAAGCGG CTACGACTGA CGCTACTGAC
GAAAATAAAG TTACCTTTAC TGACCTAAAT ATTGCCAAGC CAATTCTTAG CGCGCTTGAG
CGTAGTGGTT ATACTCACCC AACACCTATT CAAGCAGAAG CCATTCCTTT TGCATTACAA
GGTCGTGACC TTTTGTTATC TGCGCAAACG GGTAGTGGTA AAACAGCTGC ATTCGTTATC
CCAGTACTTG ATCGCTTGAG CCGTGCAACC AGCTTCGACA AATTGACCAA AGCTCTTATT
CTAACGCCAA CGCGTGAACT TGCTCAGCAA GTACATGATA GCGTACGTAC GTATTCTAAA
GATATGCGTG GTCTATTCTG CGTGCCTTTA GTTGGCGGCG CACCATACAA CGGTCAGATT
ACTGCTTTGA AAAAAGGCGT ACAAGTTATC GTTGCAACCC CAGGTCGTTT ACTTGACCAT
ATCAATGCGG GTCGCGTTGA CTTATCAAGC CTTGAAATCT TGGTACTTGA TGAAGCTGAC
CGTATGCTAG ATATGGGTTT TGCTGACGAT ATCAGCGACA TACTACGTGC AGCACCGATT
GATCGTCAAA CGATTATGTG TTCAGCAACT TGGGACGGTC CTGTCGGCAA AATCGCTGCC
AGCTTCACCA AAAACCCTGA GCGTGTATCA ATCAAAGTTG AATCTGCGCA CATCGAAGAA
AAAGTGTATT ACTGTGATGA TTTTGATCAC AAAAACCGTT TGCTTGACAA AATCGTTTGC
CACAAAGATA TGGAACAAAT CATTATCTTT GCTGCCACTA AACGTAGTAC TGAAAAATTA
GCAAAACAGC TACAAGAAGC CGGTCATAAA GCAAGCTTCC TACATGGCGA TTTGCCACAA
AGCAAGCGTA ACCGCATTGT TCAAGACCTA CGTAATGGTA AATGCAAAAT CTTAGTTGCG
ACCGACGTAG CGGCTCGTGG TCTAGACGTT CCAGCACTAT CGCACGTCAT TAACTATGAC
TTACCGCGTC AAACGGAAGA TTACGTCCAT CGTATCGGTC GTTGTGGTCG TGCAGGCCGT
ACTGGTGTTG CTATAAGCTT ATGTAGCATG GATGACCGTC CACAGCTTAA CGCTATTAAC
CGTTATTTAG ATCGTAAAAT GGAAGCCTCT GTTATCGAAG GCATGGAGCC TAAGAAAACT
TACGTTCCTA GCGAAAACAA AGGCAATGGT CGTGGTCGTG GCCGTGGTCG TTCAAACGGC
GGTGGTAATG GTAATGGTCA AGGTCGTGGT CGTTCAGCGG GTGGTTATGC TGGTTCTGGC
GCTAGTAAAC CTAGTGGTCA AGGCCGTGGT CGCCCATCAG GTGATAGCAG CAACGCTACT
GGTCAACGCG CAAGCAATGA CAGCGGTTAT CAAGGTAAGC CACGTGATTC ATCTGGCAAG
CCAAATGAGC GTTCAGGTGG CAAGCCTTAC CAAGGTAAGC GTACTGGTGC TCCTAGCCGC
GGCGATAGCA CTGGCGTTCC ACGTGGTGAG CGTGCTGCAA CGGGTCGTGG TCGTCCAAGT
GGTAGCCAAG GTCGCCCAGC AGCTCGTTCA GACAGCCGTG GTCAAGGTCG TCCAACTGGC
GGCAACCGTG GTAACAACTC GTAA
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| Protein sequence | MTDILSAIAA ENGIIESTDT PNTTANTDTN NEAATTDATD ENKVTFTDLN IAKPILSALE
RSGYTHPTPI QAEAIPFALQ GRDLLLSAQT GSGKTAAFVI PVLDRLSRAT SFDKLTKALI
LTPTRELAQQ VHDSVRTYSK DMRGLFCVPL VGGAPYNGQI TALKKGVQVI VATPGRLLDH
INAGRVDLSS LEILVLDEAD RMLDMGFADD ISDILRAAPI DRQTIMCSAT WDGPVGKIAA
SFTKNPERVS IKVESAHIEE KVYYCDDFDH KNRLLDKIVC HKDMEQIIIF AATKRSTEKL
AKQLQEAGHK ASFLHGDLPQ SKRNRIVQDL RNGKCKILVA TDVAARGLDV PALSHVINYD
LPRQTEDYVH RIGRCGRAGR TGVAISLCSM DDRPQLNAIN RYLDRKMEAS VIEGMEPKKT
YVPSENKGNG RGRGRGRSNG GGNGNGQGRG RSAGGYAGSG ASKPSGQGRG RPSGDSSNAT
GQRASNDSGY QGKPRDSSGK PNERSGGKPY QGKRTGAPSR GDSTGVPRGE RAATGRGRPS
GSQGRPAARS DSRGQGRPTG GNRGNNS
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