| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1064 |
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| Symbol | sbcD |
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| ID | 3514950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 1271096 |
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| End bp | 1272682 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637669753 |
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| Product | exodeoxyribonuclease I subunit D |
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| Protein accession | YP_264350 |
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| Protein GI | 71065623 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCT TTTATTCACC ATTAAGCCTC ATTATGTCTG TATCTGCTGT TACCCCTCTC
ACTATCCTGC ACACCTCTGA CTGGCATTTG GGACGACGAC TTTATGGACG TCTGCGCTAT
GATGAATTTG CCGCCTTTTT AAGCTGGCTA CAAGACACCA TTAGTGCGCA GCAAGTGGAT
GTACTTATTG TCGCTGGTGA TATCTTTGAT ACTATGACGC CAAGTAATAA AGCCCAAGCG
CTGTATTATG AGTTTTTAGG CACGGTTTCA AAATCATGCT GTCAGCATGT CGTCATCGTC
GCTGGCAATC ATGATTCACC AACATTTTTG GATGCCCCAA GTCATGTACT TAAGTTTTTA
AACGTCCATG TCGTTGGTAC GGCTTGCGAA GACTTGAATG ATGAGGTGAT GGTATTAGAT
GATGCAGATG GTAATCCGCA TTGTATTATC ACGGCTGTCC CTTATCTGCG TGACCGTGAT
GTGCGCAGTA GTAGTGCTGG CGAGTCAGCT CAAAGCAAAG ACGCCAATGT TATCGCTGGT
ATCTGCGCGC ACTATGATGG TGTTGCAGAG ATTTCCAGAG CCAAACAAGC TGAATTAGCC
AAAGTGCATA AGCGGCACGT CCCTATCATA GCTACAGGAC ATCTGTTTGC TGCCGGCGGC
ACCACTACCG ATGATGATGG GGTGCGTGAG CTGTATATTG GCTCGCTTGG TAAAGTCTCC
GCTGATATGT TCAGTGAAAG TTTTGATTAT GTAGCGCTTG GACATTTGCA TGTACCGCAG
CGCGTCGGTG GGCGTGAAAC CATTCGCTAT TCAGGCTCGC CTATTGCGAT GGGTTTTGGT
GAGGCGCGCC AGCAAAAACA AGTATTGCTG GTGCAGTTTG GGTCGGTGCT AAAGAATAAA
GATCTAACAC TGACAAATAC GTCTAAGAGA ATTTGTCATC AGCAGCTGAC GAATTCCATT
ATCAACATTG ACAAGACAGT AGAAAAAACC GCTAAAGCAG TCAATCAGGC AGCGAGCTTT
ATGGATGACC TGTTTGCTGA TGTGGAGTCT ATAGAAAGCG ATCAGCATAG TGAAACGAGT
ATTGAAGAAA CCTCTAAACA AACAGAGGTT ATTCTAAGTA CTCATTCCAC TTTAACCGCC
ACGCTACTGC ATCATGATAC CGCCCGTCAG ATGCAAATCA CTTCCCTACC TATTCCAACA
TTCCAAAAAT TGGCGCAAGT ATCGGGTGAT TTGGATACCA TCAATCAAAC AGTTGATAAC
ACTATTAAGA CTCTGACTGA TACAGAATCG GTCTGGTTAG AGATTATTTA CACCGGTGAT
GAGGTGGTTA GCGAATTGCG TGAAAGTATT CAAGCGATGG TAGAGGGCTT ACCCTGTGAG
GTGTTAAAAA TAAAAGATAC GCGCACTTAT AACAAAGTAC TGAATCAACA ACAAATTTCT
GAGACGCTAC AAGATTTAAA TGAGCAAGAA GTATTTGAGC GCTGCTTAAC CGCTCACAAC
GTCCCTGATG AGCAAAGACT AACCTTGCGA GAGGCTTATG GTCAAATCGT TTATGACCTG
CATCATGCAG ATACTCAAGC TGAATAA
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| Protein sequence | MAVFYSPLSL IMSVSAVTPL TILHTSDWHL GRRLYGRLRY DEFAAFLSWL QDTISAQQVD
VLIVAGDIFD TMTPSNKAQA LYYEFLGTVS KSCCQHVVIV AGNHDSPTFL DAPSHVLKFL
NVHVVGTACE DLNDEVMVLD DADGNPHCII TAVPYLRDRD VRSSSAGESA QSKDANVIAG
ICAHYDGVAE ISRAKQAELA KVHKRHVPII ATGHLFAAGG TTTDDDGVRE LYIGSLGKVS
ADMFSESFDY VALGHLHVPQ RVGGRETIRY SGSPIAMGFG EARQQKQVLL VQFGSVLKNK
DLTLTNTSKR ICHQQLTNSI INIDKTVEKT AKAVNQAASF MDDLFADVES IESDQHSETS
IEETSKQTEV ILSTHSTLTA TLLHHDTARQ MQITSLPIPT FQKLAQVSGD LDTINQTVDN
TIKTLTDTES VWLEIIYTGD EVVSELRESI QAMVEGLPCE VLKIKDTRTY NKVLNQQQIS
ETLQDLNEQE VFERCLTAHN VPDEQRLTLR EAYGQIVYDL HHADTQAE
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