Gene Psyc_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0575 
Symbol 
ID3514463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp680078 
End bp680737 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID637669267 
Producthypothetical protein 
Protein accessionYP_263870 
Protein GI71065143 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000903438 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATA AGTCGAATAG ACAGAAACTA GCGACCGCAT TACTTGCATC TTTGCCAATG 
CTTGCCATAG TTGGTGCGAC TGCCAGTCTG AGCGGTTGCG GCTTTCAGCT ACGTGGTTAT
GATGCGCCAA TGCTGTCTAA TGTGGCGAAG ACCGCGGTAA TTACCGAAGA CAATCGCACC
GCATTCCCAC TGAAGCTGCC ACTCACAAAG CGCCTAGAGG CATTGGGCGT TGATGTGATT
ACTAACATGA CCTTGGCTGA TGTCGCGAAT AACAACCAAC AGGTTGGTGC TGAAACCATC
GCTGCCATTA CTGTCAATAA CGTACGTTTT AAGCGTTATG AATTGGTCGG CGTATTGACA
GAAATTCGCT TGGTGATATC AGCTGATGTC AGCTATCAAA GCATGGATAA CGGTAAGCCT
GTGACGCTTA CCAATCCTAT TCAAGTTGAA CGTAGCTATC AGTATAACGA AGCCTCAGTG
AGTACCGACG ATCAGCAAGG CGATCAAATT CGTGAGTGGC TCTATGACAG TTTAGCGCGA
CGTATCACCG ATCAATATGT GGCAATTGCA CTGCCAAAAG TAACACCTGC CAGCGCTACC
ACCTCTGCTC AAATCGGCAA AGGTACAGGC GCTACGGCGA TTCTCGTGCC CAAACCTTAA
 
Protein sequence
MPNKSNRQKL ATALLASLPM LAIVGATASL SGCGFQLRGY DAPMLSNVAK TAVITEDNRT 
AFPLKLPLTK RLEALGVDVI TNMTLADVAN NNQQVGAETI AAITVNNVRF KRYELVGVLT
EIRLVISADV SYQSMDNGKP VTLTNPIQVE RSYQYNEASV STDDQQGDQI REWLYDSLAR
RITDQYVAIA LPKVTPASAT TSAQIGKGTG ATAILVPKP