Gene Psyc_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0562 
Symbol 
ID3514493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp656824 
End bp657582 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content41% 
IMG OID637669247 
Productoxygenase 
Protein accessionYP_263857 
Protein GI71065130 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA TTATTAGCAA TCTTGATGTG ACAAAGTTGG TGGTTGATAA TCCGATAGGC 
AAGGATAATC CGCCACTGCT GTCTGTACAT CTTAGTACCC ATGATGATCA GCCACTGCCG
ACCCAACACC TATTACAATC CTCTGATTTT GAGGTTAATT GGGAAAACAA GCTGACGGAC
AGTCAACTTG ATAAGCTCGT CGATAGTGGT TGGCTGATTA TTGATAATGT CTTTGAGCAA
AAAGCATTAT TAGCACTGCA AGCGGAAAGT GGCTTTATTA AGTATCGTGA TGCCCAGCTA
ACGGCGGGTA TTCGTATCAG TGATATTCGC GGTGATAAAA TACGCTGGAT TACCAAGGAT
TTTTTTGCAG GGTTTTATTA CTTACAAAGT ATTAATGCGC TTGCCACTTT ATTCAATCAA
AGCTTGTTTA CTGGTATTCG TCATAGTGAA GCGCATTATG CTTACTATCC AGTTGGTTTC
GGCTATCAAT GGCATAGTGA TAATCCAGCT GGGCGTGATG AGCGCGTCAT CTCGGCAGTG
TTTTACCTCA ATGATGAATG GACACCAAGT GATGGCGGCA CATTAGAAAT CGTTGATAAA
TATGGTGTCC ATCATAATGT GATGCCTGTT GCCAATAGGC TGGTGATATT TGATAGTGAC
TTACAACATC AAGTACAAAT TGCCCATCGT CAACGTTATT CTATCGCTAC CTGGATGCGC
CGTGATGGCT TAGTGCCTTT TATTGAAGAT ATTATTTAA
 
Protein sequence
MTKIISNLDV TKLVVDNPIG KDNPPLLSVH LSTHDDQPLP TQHLLQSSDF EVNWENKLTD 
SQLDKLVDSG WLIIDNVFEQ KALLALQAES GFIKYRDAQL TAGIRISDIR GDKIRWITKD
FFAGFYYLQS INALATLFNQ SLFTGIRHSE AHYAYYPVGF GYQWHSDNPA GRDERVISAV
FYLNDEWTPS DGGTLEIVDK YGVHHNVMPV ANRLVIFDSD LQHQVQIAHR QRYSIATWMR
RDGLVPFIED II