| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0513 |
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| Symbol | rpsD |
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| ID | 3514312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 607622 |
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| End bp | 608263 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637669200 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_263810 |
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| Protein GI | 71065083 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.581076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00336065 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCCGCT ATATTGGACC AAAACTCAAA TTATCACGTC GTGAAGGTAC TGACTTAGGA
CTTAAGTCTG GTGTTAAGCC ATACGACGTA AAAACGAAAA AATCGGCTCG TCCACCTGGT
CAACATGGTG TCAGTCGTAA CAAAAGCTCA GAGTACTCTC TACAGTTACG TGAAAAGCAA
AAAGTTAAGC GTATCTATGG TGTATTAGAG CGTCAGTTTG CAAACTACTA TAAAGAAGCT
GCTCGTAAGC GTGGCGCTAC TGGTGAAAAC CTGTTAGCAA TGCTTGAAAG CCGCCTTGAT
AACGTAGTAT ACCGTATGGG CTTTGGCTCA ACGCGCGCTG AAGCACGTCA GTTAGTTAGC
CATCGTACTG TTATGGTGAA AAAAGCTGGC CGTGATGAGT TTGTTCGTGT GAACATTCCA
TCAATTCAGT TGCAAGATGG TGATGTCATC GCTATTCAAG AGAAGTCTCG CGAGCAATTA
CGTATTAAAA ACGCAATTGA GCTGGCTACC CAACGTGGTA TTCCAGAATG GCTAGATGTT
GATCACAGCA AATTACAGGG CACGTTTAAA AAAGCGCCTG ATCGTATTGA TCTACCTGCT
GAAATCAACG AAAGCTTGAT CGTTGAGCTA TACTCTAAGT AA
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| Protein sequence | MARYIGPKLK LSRREGTDLG LKSGVKPYDV KTKKSARPPG QHGVSRNKSS EYSLQLREKQ
KVKRIYGVLE RQFANYYKEA ARKRGATGEN LLAMLESRLD NVVYRMGFGS TRAEARQLVS
HRTVMVKKAG RDEFVRVNIP SIQLQDGDVI AIQEKSREQL RIKNAIELAT QRGIPEWLDV
DHSKLQGTFK KAPDRIDLPA EINESLIVEL YSK
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