Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0447 |
Symbol | |
ID | 3514592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 557921 |
End bp | 559009 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637669133 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_263744 |
Protein GI | 71065017 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTTTTT TAAGGATTGT TATGAAAAGG ATTGGTAACT TATACGAATC CGTAGTCTCA GGCGAATCAT TATGGGAAGG CTATTTGGGC GCAAAGAAAA GTAAGGGTGG TCGACGTGGG TGTTTTCAGT TTGAGAAAAG CCTAGGCCGC GAGCTAAATG AATTACAAGA AGAGTTGGCA AATAACACCT ACAAACCAAG ACCTTATTTT AAATTTATAG TATATGAGCC AAAAAAGCGG GAGATATATG CCCCAGCATT TAGGGATTGT GTTGTGCAAT ATGCAATCTA TTTAAGAGTC ATGCCAATAT TTGATAAAAC ATTTATAGAC CAGTCGTTTG CCTGTCGCAC CGGACTTGGG ACACACAAAG CAGCTGAGTA TGCACAAGAC GCACTTAGAA GAGCCGGCCC CAATACCTAT ACGCTACAGT TGGACATAAA GAAGTTCTTT TACAGCATAG ACAGACCGAC TCTCAGAAAA TTATTAGAAA GAAAGATTAA GGATAAGCGC TTGGTCGATT TGATGATGTT GTTTGCGGAC TATCCCGAAC CCAAAGGCAT ACCAATTGGC AACCTACTAT CGCAAATGTT TGCGCTGATA TACATGAATC CTGTAGACCA CTACGCCACA CGAGTGCTGA AGCCAGCCGC CGGGTATTGT CGTTATGTGG ATGACTTCTT ATTGTTTGGC TTGACCAGAG CGCAAGCGCT GACTTACAGA AAGCTCCTAA CGGATTTTGT AGAACAAAAG CTCAAACTGA CCTTATCACG ATCAACGATA GCCAATACCA AAAGAGGCGC TAACTTCTGT GGCTATAGAA CATGGCGCTC CGGAAGATTT ATTAGAAAGC ATAGCTTATA CAAAACTAGA AAAGCCGTAA GGGCCAATAA ACTGGAATCT GTTATATCGC ATCTTGCGCA TGCTTCAAAA ACTCATTCAT TGCAACATCT ACTAAATTAC GCGGAGCAAC AAAATCATGG CTTATATTGT CAGCTACCAA AAATTTATCA CACGCGACAT CACCAAGCAG TTGAACGCTC CGGAAGAATC AACGGAGTTA TGCGCAATCG ATGCAGTAAC GTATGTTAG
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Protein sequence | MFFLRIVMKR IGNLYESVVS GESLWEGYLG AKKSKGGRRG CFQFEKSLGR ELNELQEELA NNTYKPRPYF KFIVYEPKKR EIYAPAFRDC VVQYAIYLRV MPIFDKTFID QSFACRTGLG THKAAEYAQD ALRRAGPNTY TLQLDIKKFF YSIDRPTLRK LLERKIKDKR LVDLMMLFAD YPEPKGIPIG NLLSQMFALI YMNPVDHYAT RVLKPAAGYC RYVDDFLLFG LTRAQALTYR KLLTDFVEQK LKLTLSRSTI ANTKRGANFC GYRTWRSGRF IRKHSLYKTR KAVRANKLES VISHLAHASK THSLQHLLNY AEQQNHGLYC QLPKIYHTRH HQAVERSGRI NGVMRNRCSN VC
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