| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0443 |
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| Symbol | |
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| ID | 3514241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 552271 |
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| End bp | 555444 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669129 |
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| Product | putative prophage LambdaSo, host specificity protein J |
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| Protein accession | YP_263740 |
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| Protein GI | 71065013 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4733] Phage-related protein, tail component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG TGATAACAAT ACAAGGCGCA AAAGCGGGTC AAGGGCAAGC AAGCCGTCCG
TCTATTGCTG ACGATACCAT TGCCTCTATC AGTCGCCTAA AAATGATTAT CGGTTTGTCC
GAGGGCGAAG TTAAAGGTCT TGCGAATGGT GCCAAAAGCA TCATGTTAGA GGGCACACCG
CTGGAAGATG CAAACGGCAA TCGCAATTTT GACGGCGTAG AGTGGGAAAT CCGTCACGGC
ACGGTTGACC AAACTTATAT CGCAGGGATG CCAAACGCAT CAAGTGAGAT TGGCGTGGGT
GTCACGGTGC GTAGTGATAC GCCTTGGATA CGCAGTATTA ACGACACTCA GTTATCCAGT
ATTAACGTCA ATATATCATT TCCGATGCTC AAAAGCGTGA CGGACAAAGG CGATGTCGTC
GGGGTCACGG TTGACTACGC GATTGACGTA CAGACGGATG GCGGCGGCTA TGTGCCCGTT
ATTACTAAGT CACTGACTGC TAAGACCAGC GGTCGTTATC AACGCACTCA CAATGTCGCT
CTGCCAGAGG CGCAATCCAA CTGGCAAATC CGTATCCGTA AAATCACAAC GGATGGTAAC
GGTGAGACAC TATTTAACAC GATGCAGATT GATAGCATTG CTGAGATAAT CGACGGTAAA
TTTAACTATC CACATACCGC GCATTTGTAT CTATCGTTTG ATGCCCGCAC ATTTAGCAGC
ATCCCAAAAG TCTCTGTCGA TATGCTGGGC GTTTATGTGC AAGTGCCTAT CAATTATGAC
ACCGATACTC GTACTAGCAC GGGTATTTGG AATGGCCAGT TTAAGCTTGG CTATACGACC
AACCCCGCTT GGCATTATTA CAACTTAATC ACCAATGATC GCTATGGTCT TGGTGATAAA
TTGCAGGCGT TTATGATTGA CAAGTGGGCG CTTGAGCATA TAGCTCGTAT CTGCGATGAG
CCAGTAGATG ACGGTAAAGG CGGTACTGAG CCACGCTTTG AGTGCAATCT CTATCTACAA
AAATCAGAAG ATGCTTATCA AGTCTTGCAG CATATCGCGG GAATCTTTCG TGGCATGAGT
TTTTGGAACG GCTCTCAGAT ATTTGTTGAT GCTGATACCT CGCGTGATTG CGAGTATGTG
ATAACTCGCG CTAATGTCAT TGGTGGTCAA TTTAGCAAGT CAGGTAGTGC AGCTAGTGAC
AGACATACGA TTGCCCAAGT CGCTTGGTCA AATCCCGATA ATACTTATGA GACTGAGTAC
GTGATGGTCC GCAATGAGCG AGCGATAGCG CAACAAGGCA TCAACGTCTT AGACTTATCA
GCAGTTGGTT GTACTAGCGA GGGACAAGCA TATCGCATGG GCTTGGCGGC ATTACTCGCT
GAGCAAAACA GAACGCAAAC GGTCAGCTTT GCAATGGGGC TTGATGGCTC ATTACCTAAT
GTTGGCAGCC GAATTGACAT AGCTGACATG ATGTTCACTG GTGCCAATAA TGGCGGCCGC
ATCTCGTCTG TAAGCGCGGA TTACACGGTT ATTACAGTCG ATAGGGATAA CATTCAAGCG
ACTGTCGGTG ATAAGTTGGT TGTCAATCTG GAGTCCGGCA AAGCGCAAAC TCGCGTTATC
ACTGCTATCA ATGGACGCGC TATCACTGTC GCCTTAGCGT TTGACCCAGT CGCTAGTCAA
AATGTCTGGG CTATTAATAG CAATGAGCTA CCAACGATGC CGTTTATCGT AATGTCAGTG
ACTAGCGATG AGGACGGTAC ACAGTATAAC TATACGGCGA TGCAGTACGA TCCAACCATG
TATGCTCAGA TTGATAATGG CACGATTATT GAGCAGCGCC CGCCCGTACC CAGTAATAAT
CCTTACATTA TCAATGCGCC CGATGCTGTC ACGCTTAGTA GTCGTCATCG TGTCGCACAA
GCTATCACCG TTACTACGCT AGAGATAACG TGGTCACAAG TCAAAGATGC CGTTGCCTAT
GATGTTGAAT GGCGTAAAGA CGATGGCGAT TGGATAAAGC TACCACGTAC CGGCAATATA
AGTGCTGAGA TAGATGGCGT TTATAGCGGT AATTATCTGG CGCGTGTGCG TGCGGTTTCT
GCTTTTGATG CGATATCAAA ACCCACAACT TCGATGTTGA CGGCTATCAC TGGCAAAGCC
GGAACGCCTC CTACTGTGGT TGGTTTAACC GCCACTGGTG CGCTATTTGG CATGGAATTG
AAGTGGAGCT TTGATACTGG CTCGGATGAT ACGGCTTATA CTGAGATTGA GGTAGGTTCA
GCACCTGCCA CTAACGTCAC GCTGCTAGGG CAATTTGGCT ACCCAACAAA TACCATGACA
ATCACAGGTC TGCAAGGTAA CTTGTCACAA TCCTATCGCG CTCGTATCGT TGATAAATTA
GGCTTTGCAT CAGCTTGGTC ATCGTGGGTT ACTGCTACGA CAAATAATAG TGTCTCAGAT
ATATTTGATT TACTAACGGG CACTGAGTTT GATACTGATA GCCCATTTAT CGACATCCCT
GCCGGGACGG TCATCGGTGG CGTAGCAATC CCCGAAGGCG TTTATCTGCG GTCGACATTT
ATACAAGACG CCTCTATTGA TAACGCCAAA ATAAAGAACT TAGATGGCGA CAAGATTACA
GCTAATACCA TCACGGCTAG CAAATTAGCA GCTAATACCA TTACAGCTGA CAAAATAGCG
ACTGGTACAA TTACAGCAGC AAGTGGCGTG ATAGGTGATT TAGCAGTAGA TACATTGCAG
ATTGCAGGTA ATGCAGTGAC AGTACCGCTT GCTGTTTATA CAGAGGCGTC AATAAATACA
AGTTTTTACA GTGCTAAGTT TGATATACAA AGTATTGTTG TTCCGGATAT AAGCGCCAGA
AAAGCTGTTC ACTTTAATTT TTCCTATACT ATTAAGAGTG CTGGAGAAGT TTCGGCGCTC
TCAATGTCTT TTGAGGTTAA GTTGGATGGC GTAGTCATTA GAAAAGGGGC AGTAGCATCG
AGTTATAATA GTACTAGAGT TTATGGACAG TGCAGCTCAA GTTTATTACT AGATGATACG
CAATTTGGAA CCCTAACAAT TGCTGTGTCC ACGAGCGGTG ACGGGGGTTT TATACCTTTA
GATTCAGGCT CAGTTTCTAA TAGATTTATT AGCGTAATTA TAACTAAGAG GTAA
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| Protein sequence | MSDVITIQGA KAGQGQASRP SIADDTIASI SRLKMIIGLS EGEVKGLANG AKSIMLEGTP
LEDANGNRNF DGVEWEIRHG TVDQTYIAGM PNASSEIGVG VTVRSDTPWI RSINDTQLSS
INVNISFPML KSVTDKGDVV GVTVDYAIDV QTDGGGYVPV ITKSLTAKTS GRYQRTHNVA
LPEAQSNWQI RIRKITTDGN GETLFNTMQI DSIAEIIDGK FNYPHTAHLY LSFDARTFSS
IPKVSVDMLG VYVQVPINYD TDTRTSTGIW NGQFKLGYTT NPAWHYYNLI TNDRYGLGDK
LQAFMIDKWA LEHIARICDE PVDDGKGGTE PRFECNLYLQ KSEDAYQVLQ HIAGIFRGMS
FWNGSQIFVD ADTSRDCEYV ITRANVIGGQ FSKSGSAASD RHTIAQVAWS NPDNTYETEY
VMVRNERAIA QQGINVLDLS AVGCTSEGQA YRMGLAALLA EQNRTQTVSF AMGLDGSLPN
VGSRIDIADM MFTGANNGGR ISSVSADYTV ITVDRDNIQA TVGDKLVVNL ESGKAQTRVI
TAINGRAITV ALAFDPVASQ NVWAINSNEL PTMPFIVMSV TSDEDGTQYN YTAMQYDPTM
YAQIDNGTII EQRPPVPSNN PYIINAPDAV TLSSRHRVAQ AITVTTLEIT WSQVKDAVAY
DVEWRKDDGD WIKLPRTGNI SAEIDGVYSG NYLARVRAVS AFDAISKPTT SMLTAITGKA
GTPPTVVGLT ATGALFGMEL KWSFDTGSDD TAYTEIEVGS APATNVTLLG QFGYPTNTMT
ITGLQGNLSQ SYRARIVDKL GFASAWSSWV TATTNNSVSD IFDLLTGTEF DTDSPFIDIP
AGTVIGGVAI PEGVYLRSTF IQDASIDNAK IKNLDGDKIT ANTITASKLA ANTITADKIA
TGTITAASGV IGDLAVDTLQ IAGNAVTVPL AVYTEASINT SFYSAKFDIQ SIVVPDISAR
KAVHFNFSYT IKSAGEVSAL SMSFEVKLDG VVIRKGAVAS SYNSTRVYGQ CSSSLLLDDT
QFGTLTIAVS TSGDGGFIPL DSGSVSNRFI SVIITKR
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