Gene Psyc_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0294 
Symbol 
ID3515098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp360599 
End bp361396 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content45% 
IMG OID637668981 
ProductABC basic amino acid transporter, ATPase subunit 
Protein accessionYP_263598 
Protein GI71064871 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.311717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATA CTGCAAATAA TCCGACTCGA CCTATCGCTT TAGATTTACA AGATATTCAT 
AAAAGCTTCG GCTCATTGGC TGTACTTAAA GGCGTATCTT TGACTGCCTA TGATGGTGAT
GTTATCTCTA TTTTAGGCTC GTCCGGCTCA GGTAAGTCGA CCCTGCTTCG CTGTATCAAT
TTGCTCGAAA AGCCCAATCA AGGTCGCATC ATTATCGGTA AAGATGAGCT GATGTTGAAG
CCGGCTAAGT CAGGCGAATT GCAAGCGGCT GATATCAAGC AGCTAGAACA CTTACGCGCC
CGCGTGGGTT TTGTCTTCCA GAATTTCAAT CTATGGCCAC ATAAAACGAT TATTGACAAT
ATCATCGAAG GGCCAATACA AGTCTTAAAA ATAAAAAAAG ACCAAGCCAT TAGTGATGCT
GAAAAGCTGC TCGATAAAGT CGGCCTGCTC GATAAAAAAG ACGCTTATCC AGCGAATCTC
TCCGGTGGTC AGCGCCAACG TGTTGCTATT GCACGCGCCC TTGCGATGCA GCCGCAAGTA
TTATTGTTTG ATGAGCCGAC TTCTGCCTTA GACCCTGAGC TAGTCAATGA AGTGCTTGCT
GTTATGCGAG AGCTGGCAGC AGAGGGACGC ACGATGCTGA TTGTGACCCA TGAGATGCGT
TTTGCTCGTG AAGTTTCTAG CAAAGTGGTG TTCTTGCATC AGGGCGTTAT TGAAGAGATT
GGTACGCCTG AACAAGTCTT TGATAATCCT AAGTCTGAGC GTGTCAAAGA CTTTATGGCA
TCACATCGTC AAAATTAA
 
Protein sequence
MLDTANNPTR PIALDLQDIH KSFGSLAVLK GVSLTAYDGD VISILGSSGS GKSTLLRCIN 
LLEKPNQGRI IIGKDELMLK PAKSGELQAA DIKQLEHLRA RVGFVFQNFN LWPHKTIIDN
IIEGPIQVLK IKKDQAISDA EKLLDKVGLL DKKDAYPANL SGGQRQRVAI ARALAMQPQV
LLFDEPTSAL DPELVNEVLA VMRELAAEGR TMLIVTHEMR FAREVSSKVV FLHQGVIEEI
GTPEQVFDNP KSERVKDFMA SHRQN